DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Adra2c and Oamb

DIOPT Version :9

Sequence 1:NP_612515.2 Gene:Adra2c / 24175 RGDID:2058 Length:458 Species:Rattus norvegicus
Sequence 2:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster


Alignment Length:594 Identity:159/594 - (26%)
Similarity:234/594 - (39%) Gaps:201/594 - (33%)


- Green bases have known domain annotations that are detailed below.


  Rat    39 WGPPPGQYSAGAVAGLAAVVGFLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATL 103
            |..|....|       .||:.|:.|..:.||.||:.||..|..||:..|.|:|:||.||:||...
  Fly    15 WTEPANLIS-------LAVLEFINVLVIGGNCLVIAAVFCSNKLRSVTNFFIVNLAVADLLVGLA 72

  Rat   104 VMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIVHLCAISLDRYWSVTQAVEYNLKRTPRRV 168
            |:|||...|:...|.||.:||.::||:||..||:||::|||||||||.:||:.|.|....:.::.
  Fly    73 VLPFSATWEVFKVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPSIMSTKKA 137

  Rat   169 KATIVAVWLISAVISFPPLVS-------------------FYRRP-------------------- 194
            |:.|..:|::|..|.|||||.                   :|...                    
  Fly   138 KSLIAGIWVLSFFICFPPLVGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDSIKDQGEA 202

  Rat   195 ----------DGAAY-------------------------------------------------- 199
                      :|.||                                                  
  Fly   203 SLPPSPPHIGNGNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTETEMDLDL 267

  Rat   200 --------PQ---------CGLNDETWYILSSCIGSFFAPCLIMGLVYARIYRVAKLRTRTLSE- 246
                    ||         |.|.::..|:|.|.:|||:.|..:|...|.||||.|...||.::: 
  Fly   268 LNAPPQNRPQTISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAAVRTTRAINQG 332

  Rat   247 ---KRGPAG---------------------------PDGASPTTENGLGKAAGEN---------G 272
               .:|..|                           .:|::.:|...||..:.|.         .
  Fly   333 FKTTKGSKGIGSRFEEQRLTLRIHRGRGSNQQDSMHSNGSTQSTTTTLGTPSPERLSKYATRRLH 397

  Rat   273 HCAPPRTEVE-PDESSAA----------ERRRRRGAL----RRGGRRREGAEGDT-------GSA 315
            |....:..|. |...:.:          |||:...||    ..|...||..|...       |.|
  Fly   398 HHDKIKISVSYPSSENISELAGHGDVGHERRQSGNALFAVHYNGTNGRESTESQLYRQQQQHGVA 462

  Rat   316 DG----PGPGLAAEQGARTASRSPGPGGRLSRASSRSVEFFLSRRRRARSSVCRRKVAQAREKRF 376
            ..    .|.|| .|...|.::.|...|...||.:::.:     .||..::.|.|.::    |.:.
  Fly   463 SSCYLQVGKGL-PELARRQSNTSEAGGSGHSRPANKKM-----GRRNIKAQVKRFRM----ETKA 517

  Rat   377 TFVLAVVMGVFVLCWFPFFFSYSLYGICREACQLPEPLFKFFFWIGYCNSSLNPVIYTVFNQDFR 441
            ...||:::|:|:.||.|||..|.:...|:: |..| .||...||:|||||::||:||.:|::|||
  Fly   518 AKTLAIIVGMFIFCWCPFFTMYIIRPFCQD-CVDP-LLFSVLFWLGYCNSAVNPMIYALFSKDFR 580

  Rat   442 RSFKHILFR 450
            .:||.|:.|
  Fly   581 FAFKRIICR 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Adra2cNP_612515.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 245..343 28/163 (17%)
OambNP_001262774.1 7tm_4 29..>154 CDD:304433 56/124 (45%)
7tm_1 37..>181 CDD:278431 60/143 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
32.870

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