DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Adra2b and Oamb

DIOPT Version :9

Sequence 1:NP_612514.2 Gene:Adra2b / 24174 RGDID:2057 Length:453 Species:Rattus norvegicus
Sequence 2:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster


Alignment Length:617 Identity:161/617 - (26%)
Similarity:238/617 - (38%) Gaps:224/617 - (36%)


- Green bases have known domain annotations that are detailed below.


  Rat    10 EPYSVQATAAIASAITFLILFTIFGNALVILAVLTSRSLRAPQNLFLVSLAAADILVATLIIPFS 74
            ||.::.:.|    .:.|:.:..|.||.|||.||..|..||:..|.|:|:||.||:||...::|||
  Fly    17 EPANLISLA----VLEFINVLVIGGNCLVIAAVFCSNKLRSVTNFFIVNLAVADLLVGLAVLPFS 77

  Rat    75 LANELLGYWYFWRAWCEVYLALDVLFCTSSIVHLCAISLDRYWAVSRALEYNSKRTPRRIKCIIL 139
            ...|:...|.|...||.::||:||..||:||::|||||||||.||:|.:.|.|..:.::.|.:|.
  Fly    78 ATWEVFKVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPSIMSTKKAKSLIA 142

  Rat   140 TVWLIAAVISLPPLIYKGDQR-------PE----------------------------------- 162
            .:|:::..|..|||:...||:       |:                                   
  Fly   143 GIWVLSFFICFPPLVGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDSIKDQGEASLPPS 207

  Rat   163 ----------------------------------------------------------------P 163
                                                                            |
  Fly   208 PPHIGNGNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTETEMDLDLLNAPP 272

  Rat   164 RGLPQ---------CELNQEAWYILASSIGSFFAPCLIMILVYLRIYVIAKRS------------ 207
            :..||         |||..:..|:|.|::|||:.|..:|:..|.|||..|.|:            
  Fly   273 QNRPQTISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAAVRTTRAINQGFKTTK 337

  Rat   208 HCRGLGAK-----------RGSGEGE--------SKKPQPVAGGVPTSA--------------KV 239
            ..:|:|::           ||.|..:        |.:......|.|:..              |:
  Fly   338 GSKGIGSRFEEQRLTLRIHRGRGSNQQDSMHSNGSTQSTTTTLGTPSPERLSKYATRRLHHHDKI 402

  Rat   240 PTLVSPLSS--VGEANGHPKPPREKEEGETPEDPEARALPPTWSALPRSGQG----QKKGTSGAT 298
            ...||..||  :.|..||.....|:.:                     ||..    ...||:|. 
  Fly   403 KISVSYPSSENISELAGHGDVGHERRQ---------------------SGNALFAVHYNGTNGR- 445

  Rat   299 AEEGDEEDEEEVEECEPQTLPASPASVCN-------PPLQQPQTSRVLATLRGQVL-LGKNVGVA 355
                 |..|.::...:.|   ...||.|.       |.|.:.|::...|...|... ..|.:|  
  Fly   446 -----ESTESQLYRQQQQ---HGVASSCYLQVGKGLPELARRQSNTSEAGGSGHSRPANKKMG-- 500

  Rat   356 SGQWWRRRTQLSREKRFTF------VLAVVIGVFVVCWFPFFFSYSLGAICPQHCKVPHGLFQFF 414
                  ||...::.|||..      .||:::|:|:.||.|||..|.:...| |.|..|. ||...
  Fly   501 ------RRNIKAQVKRFRMETKAAKTLAIIVGMFIFCWCPFFTMYIIRPFC-QDCVDPL-LFSVL 557

  Rat   415 FWIGYCNSSLNPVIYTVFNQDFRRAFRRILCR 446
            ||:|||||::||:||.:|::|||.||:||:||
  Fly   558 FWLGYCNSAVNPMIYALFSKDFRFAFKRIICR 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Adra2bNP_612514.2 7tm_4 26..>157 CDD:304433 58/130 (45%)
7tm_1 34..429 CDD:278431 144/574 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 213..331 28/163 (17%)
OambNP_001262774.1 7tm_4 29..>154 CDD:304433 55/124 (44%)
7tm_1 37..>181 CDD:278431 59/143 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
32.870

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