DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KIF4A and klp3

DIOPT Version :10

Sequence 1:NP_036442.3 Gene:KIF4A / 24137 HGNCID:13339 Length:1232 Species:Homo sapiens
Sequence 2:NP_594686.1 Gene:klp3 / 2542195 PomBaseID:SPAC1834.07 Length:554 Species:Schizosaccharomyces pombe


Alignment Length:597 Identity:195/597 - (32%)
Similarity:299/597 - (50%) Gaps:101/597 - (16%)


- Green bases have known domain annotations that are detailed below.


Human    10 VRVALRCRPLVPKEISEGCQMCLSFVPGEPQVVVGTDK---SFTYDFVFDPSTEQEEVFNTAVAP 71
            ::|..|.||....|...|....: :...:..|.:.|..   :|.:|.||.||:.|.::|:.::..
pombe     4 IKVVCRIRPTNQLEQDLGGNNVI-YPLNDSTVHIETSDYSGNFVFDRVFHPSSTQNDIFSYSIES 67

Human    72 LIKGVFKGYNATVLAYGQTGSGKTYSMGGAYTAEQENEPTVGVIPRVIQLLFKEI-DKKSDFEFT 135
            .:..:|.|||.||||||||||||||:|.|.    :.|....|:.||:::.:|.:| |..|..|:.
pombe    68 TVDDLFLGYNGTVLAYGQTGSGKTYTMMGI----ENNFEKEGMTPRMLRRIFDKIRDSPSTTEYE 128

Human   136 LKVSYLEIYNEEILDLLCPSREKAQINIREDPKEGIKIVGLTEKTVLVALDT--VSCLEQGNNSR 198
            :||||:|||.|:|.|||  |.:..::.:.||..:|:.:.||  ||:.|:.:|  :..|.:|..||
pombe   129 VKVSYMEIYMEKIHDLL--SEKNDRLTVHEDKLQGVYVQGL--KTIYVSSETEALDILNKGMGSR 189

Human   199 TVASTAMNSQSSRSHAIFTISLEQRKKSDKNSSFRSKLHLVDLAGSERQKKTKAEGDRLKEGINI 263
            .||||:||:||||||:||.:.:.| ..::...:.|.:|.||||||||...|:.|.|..|:|...|
pombe   190 AVASTSMNAQSSRSHSIFVLEVVQ-TDTESGETRRGRLFLVDLAGSESVGKSGAVGQTLEEAKKI 253

Human   264 NRGLLCLGNVISALGDDKKGGFVPYRDSKLTRLLQDSLGGNSHTLMIACVSPADSNLEETLNTLR 328
            ||.|..||.||::|.|.|. ..||||||||||:|::||||||.|.:|...||...|..|||:|||
pombe   254 NRSLSTLGMVINSLTDSKL-SHVPYRDSKLTRILKESLGGNSRTTLIINCSPDSYNATETLSTLR 317

Human   329 YADRARKIKNKPIVNIDPQTAELNHLKQQVQQLQVLLLQ---------------AHGGTLPGSIT 378
            :..||:.||||.:||.:   ..::.:|:|:...:..|.:               .|.....|   
pombe   318 FGHRAKSIKNKAVVNSE---LSVDEMKRQLYIYKDALSRCVCGARINNNLDYNNCHSNVWSG--- 376

Human   379 VEPSENLQSLMEKNQSLVEENEKLSRGLSEA----AGQTAQMLERIILTEQANEKMNAKLEELRQ 439
             |.|..|.:|.||:            .|.||    ..:|.|        |..|::..:.:..:.:
pombe   377 -EHSLTLSNLAEKS------------NLKEAEIIQGNRTIQ--------ESNNDRDESTVASIHR 420

Human   440 HAACKLDLQKLVETLEDQELKENVEIICNLQQLITQLSDETVACMAAAIDTAVEQEAQVE----- 499
            |......:.:|....: .|||:...::.:.:|   ||||     :..|:..|  ||..||     
pombe   421 HNFDSDSINRLYAEAQ-LELKQRDGVLSSTKQ---QLSD-----LMTALGDA--QERYVELVKNH 474

Human   500 ------TSPETSRSSDAFTTQHALRQAQMSKE-------LVELNKALA---------LKEALARK 542
                  |:..:......||.:...:...::.|       |..|:.:||         :|..::::
pombe   475 RVNSNLTANNSLNDKPGFTIEQKDKNFSINNERNNFLQKLSTLDSSLAALVNVQRKLIKALISKE 539

Human   543 MTQNDSQLQPIQ 554
            ..||.:.::.||
pombe   540 RPQNGTVIKKIQ 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KIF4ANP_036442.3 KISc_KIF4 8..337 CDD:276823 142/332 (43%)
PRK11281 383..>646 CDD:481316 40/203 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 496..515 5/29 (17%)
Smc <517..>1033 CDD:440809 10/54 (19%)
Required for the interaction with PRC1. /evidence=ECO:0000269|PubMed:15297875 663..1232
Nuclear localization signal. /evidence=ECO:0000269|PubMed:11736643 793..798
Globular 1000..1232
CRD, required for [4Fe-4S] cluster binding and localization to the spindle midzone and midbody during anaphase and telophase. /evidence=ECO:0000269|PubMed:29848660 1086..1144
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1122..1142
klp3NP_594686.1 KISc_KHC_KIF5 1..325 CDD:276820 142/331 (43%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.