| Sequence 1: | NP_001380015.1 | Gene: | prp-19 / 24104882 | WormBaseID: | WBGene00020423 | Length: | 492 | Species: | Caenorhabditis elegans |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_958875.1 | Gene: | prpf19 / 321544 | ZFINID: | ZDB-GENE-030131-263 | Length: | 505 | Species: | Danio rerio |
| Alignment Length: | 506 | Identity: | 264/506 - (52%) |
|---|---|---|---|
| Similarity: | 353/506 - (69%) | Gaps: | 17/506 - (3%) |
- Green bases have known domain annotations that are detailed below.
|
Worm 1 MSFVCGISGELTEDPVVSQVSGHIFDRRLIVKFIAENGTDPISHGELSEDQLVSLKSGGTGSAPR 65
Worm 66 NVSGTSIPSLLKMLQDEWDTVMLNSFSLRQQLQIARQELSHSLYQHDAACRVISRLSKELTAARE 130
Worm 131 ALSTLKPHT------SAKVDDDVSID------ESEDQQGLSEAILAKLEEKSKSLTAERKQRGKN 183
Worm 184 LPEGLAKTEELAELKQTASHTGIHSTGTPGITALDI---KGNLSLTGGIDKTVVLYDYEKEQVMQ 245
Worm 246 TFKGHNKKINAVVLHPDNITAISASADSHIRVWSATDSSSKAIIDVHQAPVTDISLNASGDYILS 310
Worm 311 ASDDSYWAFSDIRSGKSLCKVSVEPGSQIAVHSIEFHPDGLIFGTGAADAVVKIWDLKNQTVAAA 375
Worm 376 FPGHTAAVRSIAFSENGYYLATGSEDGEVKLWDLRKLKNLKTFANEEKQPINSLSFDMTGTFLGI 440
Worm 441 GGQKVQVLHVKSWSEVVSLSDHSGPVTGVRFGENARSLVTCSLDKSLRVFS 491 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| prp-19 | NP_001380015.1 | RING-Ubox_PRP19 | 4..56 | CDD:319570 | 30/51 (59%) |
| Prp19 | 70..134 | CDD:400774 | 51/63 (81%) | ||
| SMC_prok_B | <74..>201 | CDD:274008 | 73/138 (53%) | ||
| WD40 | 213..491 | CDD:238121 | 145/280 (52%) | ||
| WD40 repeat | 255..291 | CDD:293791 | 14/35 (40%) | ||
| WD40 repeat | 296..335 | CDD:293791 | 23/38 (61%) | ||
| WD40 repeat | 342..377 | CDD:293791 | 20/34 (59%) | ||
| WD40 repeat | 383..418 | CDD:293791 | 26/34 (76%) | ||
| WD40 repeat | 456..490 | CDD:293791 | 18/33 (55%) | ||
| prpf19 | NP_958875.1 | Ubox | 2..60 | CDD:128780 | 32/57 (56%) |
| Prp19 | 69..132 | CDD:285771 | 50/62 (81%) | ||
| WD40 | 224..504 | CDD:238121 | 145/280 (52%) | ||
| WD40 | <225..505 | CDD:225201 | 145/281 (52%) | ||
| WD40 repeat | 225..263 | CDD:293791 | 16/37 (43%) | ||
| WD40 repeat | 269..305 | CDD:293791 | 14/35 (40%) | ||
| WD40 repeat | 310..345 | CDD:293791 | 21/34 (62%) | ||
| WD40 repeat | 355..390 | CDD:293791 | 20/34 (59%) | ||
| WD40 repeat | 396..434 | CDD:293791 | 27/37 (73%) | ||
| WD40 repeat | 439..465 | CDD:293791 | 10/25 (40%) | ||
| WD40 repeat | 479..503 | CDD:293791 | 12/23 (52%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C161032399 | |
| Domainoid | 1 | 1.000 | 109 | 1.000 | Domainoid score | I4414 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG0289 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 522 | 1.000 | Inparanoid score | I729 |
| OMA | 1 | 1.010 | - | - | QHG54686 | |
| OrthoDB | 1 | 1.010 | - | - | D1049599at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0003405 | |
| OrthoInspector | 1 | 1.000 | - | - | oto16933 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_102145 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR43995 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R276 |
| SonicParanoid | 1 | 1.000 | - | - | X2757 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 15 | 14.840 | |||||