| Sequence 1: | NP_062684.2 | Gene: | Smc1a / 24061 | MGIID: | 1344345 | Length: | 1233 | Species: | Mus musculus |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_651211.2 | Gene: | SMC1 / 42853 | FlyBaseID: | FBgn0040283 | Length: | 1238 | Species: | Drosophila melanogaster |
| Alignment Length: | 1229 | Identity: | 605/1229 - (49%) |
|---|---|---|---|
| Similarity: | 868/1229 - (70%) | Gaps: | 23/1229 - (1%) |
- Green bases have known domain annotations that are detailed below.
|
Mouse 3 FLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKTLRDLIHG 67
Mouse 68 APVGKPAANRAFVS--MVYSEEGAEDRTFARVIVGGSSEYKINNKVVQLHEYSEELEKLGILIKA 130
Mouse 131 RNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEEDTQFNYHRKKNIAAE 195
Mouse 196 RKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKDKKRMDKVE 260
Mouse 261 DELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIKAKENTSHKIKKLEAAKKSLQNAQKH 325
Mouse 326 YKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDLTLEENQVKKYHRLKEEASKRAATLA 390
Mouse 391 QELEKFNRDQKADQDRLDLEERKKVETEAKIKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKL 455
Mouse 456 EGELTEEVEMAKRRIDEINKELNQVMEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLI 520
Mouse 521 DLCQPTQKKYQIAVTKVLGKNMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKL 585
Mouse 586 REL---KGAKLVIDVIRYEPPHIKKALQYACGNALVCDNVEDARRIAFG-GHQRHKTVALDGTLF 646
Mouse 647 QKSGVISGGASDLKAKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMR 711
Mouse 712 LKYSQSDLEQTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEV 776
Mouse 777 FEEFCREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQT 841
Mouse 842 VKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGGANKEMT 906
Mouse 907 HLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGSSQGEESVSGSQRTSS 971
Mouse 972 IYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRIAAPNMKAMEKLESVRD 1036
Mouse 1037 KFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATNIDEIYKALSRNSSAQAFLGPE 1101
Mouse 1102 NPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTN 1166
Mouse 1167 IGKVANYIKEQSTCNFQAIVISLKEEFYTKAESLIGVYPEQGDCVISKVLTFDLTKYPD 1225 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Smc1a | NP_062684.2 | SMC_N | 3..1210 | CDD:308206 | 597/1212 (49%) |
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 284..308 | 11/23 (48%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 348..369 | 7/20 (35%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 947..969 | 3/21 (14%) | |||
| SMC1 | NP_651211.2 | Smc | 26..1216 | CDD:224117 | 595/1206 (49%) |
| ABC_SMC1_euk | 27..>171 | CDD:213242 | 87/145 (60%) | ||
| SMC_hinge | 535..653 | CDD:214944 | 70/118 (59%) | ||
| DUF4700 | <697..>810 | CDD:292399 | 52/113 (46%) | ||
| ABC_SMC1_euk | <1130..1232 | CDD:213242 | 72/102 (71%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 1151 | 1.000 | Domainoid score | I17 |
| eggNOG | 1 | 0.900 | - | - | E1_COG1196 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H4597 | |
| Inparanoid | 1 | 1.050 | 1171 | 1.000 | Inparanoid score | I200 |
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 1 | 1.010 | - | - | QHG53603 | |
| OrthoDB | 1 | 1.010 | - | - | D326079at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0001963 | |
| OrthoInspector | 1 | 1.000 | - | - | otm43758 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_101499 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR18937 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1351 |
| SonicParanoid | 1 | 1.000 | - | - | X1284 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 1 | 0.960 | - | - | ||
| 15 | 14.870 | |||||