DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Kcng2 and Shawl

DIOPT Version :9

Sequence 1:NP_001177302.1 Gene:Kcng2 / 240444 MGIID:3694646 Length:480 Species:Mus musculus
Sequence 2:NP_001097131.2 Gene:Shawl / 5740840 FlyBaseID:FBgn0085395 Length:937 Species:Drosophila melanogaster


Alignment Length:584 Identity:151/584 - (25%)
Similarity:234/584 - (40%) Gaps:162/584 - (27%)


- Green bases have known domain annotations that are detailed below.


Mouse    33 VIINVGGCRVRLAWAALARCPLARLERLRACRGHDELLRVCDDYDVSRDEFFFDRSPCAFRAIVA 97
            :|:||.|.|.....|.|.:.|..||.||      .|.|.   :||...:|:||||.|..|..|:.
  Fly     7 IILNVSGIRYETYKATLKKIPATRLSRL------TEALA---NYDPVLNEYFFDRHPGVFTQILN 62

Mouse    98 LLRAGKLRLLRGPCALAFRDELAYWGIDEARLERCC-------------LRRLRRREEEAAEASA 149
            ..|.|||......|...|.:||.:||:|..::|.||             |..|.:.:.|..:.:.
  Fly    63 YYRTGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWSTYSIHRDTQNTLAILDKLDIENEKPTE 127

Mouse   150 AQPAR--GPPTSPGRALGSGRL---ERGRQRLRDVVENPHSGLAGRLFAYVSVAFVAVTAVGLCL 209
            .|.||  |..    .||.:|.|   :|.:.::..:.:.|.|....::.|.:||.|:.|:.:..||
  Fly   128 EQIARLFGFE----EALSNGELNCWQRIKPKIWAMFDEPSSSTGAKIVAGMSVFFIFVSVISFCL 188

Mouse   210 STMPDVR---------------------------------------------------------- 216
            .|.|..|                                                          
  Fly   189 KTHPGFRVDLPSGAHDAHGPGAGGPPHGHDPMGEPPQTHQYHQHSITPPSGSIGPTFRVTNYTSY 253

Mouse   217 --------------AEEERGECSTKCRNL-----------------------------------F 232
                          |..:.|:.....||:                                   |
  Fly   254 SSGNFTASGQATPIATIKGGQRQRLKRNINGSILNEFIEEKILGHNGRRKHGWIETYGQPHEAFF 318

Mouse   233 VLETVCVAWFSFEFLLRSLQAESKCAFLRTPLAIIDILAILPFYVSLLAGLAAGPTGSKMLERAG 297
            .:|.||..||..|.::|.:.:.:...|:::|:.|||..|.|.||..::         .:|.|..|
  Fly   319 YVELVCNVWFFIEVIIRLIVSPNLWQFIKSPVNIIDFTATLSFYTDVM---------QRMGEYTG 374

Mouse   298 LVLRLLRALRVLYVMRLARHSLGLRSLGLTVRRCAREFGLLLLFLCVAMALFAPLVHLAER-ELG 361
            | |.....:|::.:.:|.|||.|||.|..|.:..|:|..||:.||.:.:..||.|.:.||: :..
  Fly   375 L-LEAFSIVRIMRLFKLTRHSPGLRILIHTFKASAKELTLLVFFLVLGIVFFASLAYYAEKLQDN 438

Mouse   362 AHRDFSSVPASYWWAVISMTTVGYGDMVPRSLPGQVVALSSILSGILLMAFPVT------SIFHT 420
            ....|.|:|...|||:::||||||||:.|::.||..|.....|:|:|.:|.||.      |:|::
  Fly   439 PDNQFKSIPLGLWWAIVTMTTVGYGDVAPKTYPGMFVGALCALAGVLTIALPVPVIVSNFSMFYS 503

Mouse   421 FSRSYSELKEQQQRAASPEPALREDSTRDDSTRSASATEDSSQDPETAG---AAGSLP-GRVGP 480
            .:::.|:|.::::|....|...|:   |:.:......|....|.|.|..   |.|.:| |..||
  Fly   504 HTQARSKLPKKRRRVLPVEQPRRK---REPTAPHRGRTNAIKQTPPTGPGLVAGGVVPVGAGGP 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kcng2NP_001177302.1 BTB_POZ 33..127 CDD:365784 35/93 (38%)
Ion_trans 190..429 CDD:395416 84/352 (24%)
ShawlNP_001097131.2 BTB 7..99 CDD:197585 37/100 (37%)
BTB_2 7..97 CDD:280393 36/98 (37%)
Ion_trans 307..506 CDD:278921 69/208 (33%)
Ion_trans_2 <449..499 CDD:285168 21/49 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D818306at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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