Protein Alignment Rnf13 and rnf13

DIOPT Version :9

• Sequence 1: NP_001106884.1
• Gene: Rnf13 / 24017
• MGIID: 1346341
• Length: 381
• Species: Mus musculus
• Sequence 2: NP_001008015.1
• Gene: rnf13 / 493377
• XenbaseID: XB-GENE-954771
• Length: 383
• Species: Xenopus tropicalis
• Alignment Length: 359
• Identity: 272/359 - (75%)
• Similarity: 323/359 - (89%)
• Gaps: 2/359 - (0%)

Mouse    25 AFLNLLPVEADILAYNFENASQTFEDLPARFGYRLPAEGLKGFLINSKPENACEPIVPPP-LKDN 88
            |.::|:||:||:.||..:|.|:||:|||||||||||::||||:::.:||||||:||.||| |:||
 Frog    25 AVIHLVPVQADVAAYTADNVSRTFDDLPARFGYRLPSDGLKGYIVTAKPENACQPISPPPLLRDN 89

Mouse    89 SSGTFIVLIRRLDCNFDIKVLNAQRAGYKAAIVHNVDSDDLISMGSNDIDTLKKIDIPSVFIGES 153
            :|..|||||:||:||||:||||||:||:|||:|:||||||||||||||:|.||:|||||||||||
 Frog    90 TSSVFIVLIKRLECNFDLKVLNAQKAGFKAAVVYNVDSDDLISMGSNDVDILKQIDIPSVFIGES 154

Mouse   154 SANSLKDEFTYEKGGHIILVPELSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRNRRNRL 218
            ||..||:||::||||:|:|||:|:||||||||||||||||||:||||||||||||||||.|||||
 Frog   155 SARFLKEEFSWEKGGYIVLVPDLTLPLEYYLIPFLIIVGICLVLIVIFMITKFVQDRHRARRNRL 219

Mouse   219 RKDQLKKLPVHKFKKGDEYDVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQ 283
            |||||||||:|||||||||||||:||:|||:||||||||||||||||||||||||||||||||||
 Frog   220 RKDQLKKLPIHKFKKGDEYDVCAVCLDEYEEGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQ 284

Mouse   284 KVVPSQGDSDSDTDSSQEENQVSEHTPLLPPSASARTQSFGSLSESHSHHNMTESS-DYEDDDNE 347
            |||||||||:||:|||||:|:|||:||||.|.|||.|||||::|||||..||.||| :.||||::
 Frog   285 KVVPSQGDSESDSDSSQEDNEVSENTPLLRPMASASTQSFGAISESHSQQNMMESSGEDEDDDDD 349

Mouse   348 ETDSSDADNEITDHSVVVQLQPNGEQDYNIANTV 381
            |.||..:|.|....|||||||.|.|::....|||
 Frog   350 EDDSDSSDEEHNTESVVVQLQHNMERESRERNTV 383

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rnf13	NP_001106884.1	PA_C_RZF_like	23..180	CDD:239038	109/155 (70%)
		RING-H2_RNF167	238..283	CDD:319711	41/44 (93%)
		RING-H2 finger (C3H2C3-type)	240..281	CDD:319711	37/40 (93%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	285..381		61/96 (64%)
rnf13	NP_001008015.1	PA_C_RZF_like	24..181	CDD:239038	109/155 (70%)
		RING_Ubox	239..284	CDD:388418	41/44 (93%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	152	1.000	Domainoid score	I20549
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	1	1.000	-	-		H13493
Inparanoid	1	1.050	570	1.000	Inparanoid score	I6679
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1487241at2759
OrthoFinder	1	1.000	-	-		FOG0001489
OrthoInspector	1	1.000	-	-		oto194649
Panther	1	1.100	-	-	LDO	PTHR22765
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X670
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	9	9.160