DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Slc26a4 and CG5404

DIOPT Version :9

Sequence 1:NP_035997.1 Gene:Slc26a4 / 23985 MGIID:1346029 Length:780 Species:Mus musculus
Sequence 2:NP_650482.1 Gene:CG5404 / 41901 FlyBaseID:FBgn0038354 Length:627 Species:Drosophila melanogaster


Alignment Length:587 Identity:150/587 - (25%)
Similarity:252/587 - (42%) Gaps:149/587 - (25%)


- Green bases have known domain annotations that are detailed below.


Mouse    69 LPILDWLPKYRVKEWLLSDIISGVSTGLVGTLQGMAYALLAAVPVQFGLYSAFFPILTYFVFGTS 133
            :|:..|||.|.. ||.:.|.|:|::.||....:.||.||||.:|.::||.|||...|.|.|||:.
  Fly    49 VPVFQWLPLYST-EWGIDDFIAGITLGLTIIPESMACALLAGLPARYGLCSAFIGPLIYMVFGSI 112

Mouse   134 RHISVGPFPVVSLMVGSVVLSMAPDDHFLVPSGNGSALNSTTLDTGTRDAARVLLASTLTLLVGI 198
            ..:.:||..:|:|:  ||..::.....|                           |..||.|.||
  Fly   113 DKVIIGPTSLVALV--SVQFTVGRPIEF---------------------------AFLLTFLSGI 148

Mouse   199 IQLVFGGLQIGFIVRYLADPLVGGFTTAAAFQVLVSQLKIVLNV-----STKNYNGILSIIYTLI 258
            :|::.|.:::|||..:::.|::..|::|.|..|:.||||::|.:     ...|..|:||      
  Fly   149 VQIIMGTMRMGFIFEFISMPVIKAFSSATAILVIESQLKVLLGIKYLVAGLMNSVGMLS------ 207

Mouse   259 EIFQNIGDTNIADFIAGLLTIIVCMAVKELNDRFKH------------------RIPVPIPIEVI 305
               ..|.::|:||.|.|:..|:..:.: ||.||..:                  |..:.:.|..|
  Fly   208 ---SRIEESNMADLIMGVCAIVFLLLL-ELLDRVANNEKRNKILRIFCRYLSTSRNTLIVLIAAI 268

Mouse   306 VTII--------ATAISYGA---------------NLEKNYNA-GIVKSIPSGFLPPVLPSVGLF 346
            |:.|        ..|:|..|               ..|:||:. .::|.:..|.:  |:|.||:.
  Fly   269 VSFIWIQKCGQVPYALSKNALSTLPNFTVPSFHIETAERNYSIWEVLKELNIGII--VIPIVGIL 331

Mouse   347 SDMLAASFSIAVVAYAIAVSVGKVYATKHDYVIDGNQEFIAFGISNVFSGFFSCFVATTALSRTA 411
            ::                :|:||:....   ::|.|||.:..|:.|:|........::.|.:|.|
  Fly   332 TN----------------ISIGKLTPKG---LVDTNQELLTVGLCNMFGSCVQAMPSSGAFTRYA 377

Mouse   412 VQESTGGKTQVAGLISAVIVMVAIVALGRLLEPLQKSVLAAVVIANLKGMFMQVCD--VP-RLWK 473
            :..:.|.:|.:|.|...:||::|:..|......:.::.|||::|.::    ..:.|  :| |||:
  Fly   378 ISTACGLRTPMANLYLGIIVLLALSYLSPYFNYIPEATLAAILICSI----FTLLDFKLPMRLWR 438

Mouse   474 QNKTDAVIWVFTCIMSIILGLDLGLLAG-------LLFALLTVVLRV---QFPSWNGLGSVPSTD 528
            .:|.|...|:....:|::.|:::||...       |||......:||   |......:...||..
  Fly   439 DSKRDFATWLLCFCVSVLFGVEVGLFVSIVVTALHLLFLWARPEIRVKIEQLDEMQYIRVTPSNG 503

Mouse   529 IYKSITHYKNLEEPEGVKILRFSSPIFYGNVDGFKKC----INSTVGFDAIRVYNKRLKALRRIQ 589
            ||....:|  |.|    ::|              |.|    ...||..|..|:......|.:.|.
  Fly   504 IYFPAINY--LRE----RVL--------------KACEQADFRITVVIDGQRISGMDYTAAQGIS 548

Mouse   590 KL 591
            ||
  Fly   549 KL 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc26a4NP_035997.1 sulP 70..725 CDD:273284 150/586 (26%)
CG5404NP_650482.1 sulP 50..557 CDD:273284 150/586 (26%)
STAS_SulP_like_sulfate_transporter 498..>554 CDD:132913 18/73 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0659
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3293
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000041
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X49
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.760

Return to query results.
Submit another query.