Sequence 1: | NP_035995.1 | Gene: | Pcbp1 / 23983 | MGIID: | 1345635 | Length: | 356 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001246875.1 | Gene: | mub / 40436 | FlyBaseID: | FBgn0262737 | Length: | 573 | Species: | Drosophila melanogaster |
Alignment Length: | 379 | Identity: | 174/379 - (45%) |
---|---|---|---|
Similarity: | 235/379 - (62%) | Gaps: | 45/379 - (11%) |
- Green bases have known domain annotations that are detailed below.
Mouse 3 AGVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNA 67
Mouse 68 IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQ 132
Mouse 133 VAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMP-ASSPVICAG 196
Mouse 197 G-------------QDRC-----SDAAGYPHA-THDLEGPPLDAYSIQG-----QHTISPL-DLA 236
Mouse 237 KLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWAS-LDASTQTTHELTIPNNLIGCIIGRQGA 300
Mouse 301 NINEIRQMSGAQIKIANPVE---GSSGRQVTITGSAASISLAQYLINARLSSEK 351 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Pcbp1 | NP_035995.1 | KH-I_PCBP1_2_rpt1 | 13..82 | CDD:411943 | 50/68 (74%) |
KH-I_PCBP1_2_rpt2 | 92..169 | CDD:411946 | 45/76 (59%) | ||
KH-I_PCBP1_2_rpt3 | 276..351 | CDD:411949 | 38/77 (49%) | ||
mub | NP_001246875.1 | PCBP_like_KH | 25..86 | CDD:239089 | 45/60 (75%) |
PCBP_like_KH | 109..172 | CDD:239089 | 39/62 (63%) | ||
KH-I | 305..368 | CDD:238053 | 33/62 (53%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167831592 | |
Domainoid | 1 | 1.000 | 97 | 1.000 | Domainoid score | I7213 |
eggNOG | 1 | 0.900 | - | - | E1_KOG2190 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 328 | 1.000 | Inparanoid score | I2438 |
Isobase | 1 | 0.950 | - | 0.861654 | Normalized mean entropy | S2056 |
OMA | 1 | 1.010 | - | - | QHG52907 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0001027 | |
OrthoInspector | 1 | 1.000 | - | - | otm43000 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR10288 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X408 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
13 | 12.810 |