DRSC/TRiP Functional Genomics Resources

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Protein Alignment Osr1 and sob

DIOPT Version :10

Sequence 1:NP_035989.1 Gene:Osr1 / 23967 MGIID:1344424 Length:266 Species:Mus musculus
Sequence 2:NP_476882.1 Gene:sob / 33581 FlyBaseID:FBgn0004892 Length:578 Species:Drosophila melanogaster


Alignment Length:150 Identity:90/150 - (60%)
Similarity:102/150 - (68%) Gaps:12/150 - (8%)


- Green bases have known domain annotations that are detailed below.


Mouse   118 DFANLALAATQ-EDPTKLGRGEGPGSPAGGLGALLDVTKLSPEKKPTRGRLPSKTKKEFVCKFCG 181
            |.|..:|.||. :|...:..|...|..||.:|.|.:....:......|      :||:|:||||.
  Fly   343 DSALHSLQATMYQDKMSVISGAAGGVGAGAVGGLEEAGSSAAAAAAQR------SKKQFICKFCN 401

Mouse   182 RHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTL 246
            |.||||||||||||||||||||:||||.||||||||||||||||||||||||.||||||||||||
  Fly   402 RQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDHRYIHSKEKPFKCAECGKGFCQSRTL 466

Mouse   247 AVHKTLHSQVKELKTSKIKC 266
            ||||.||     ::.|..||
  Fly   467 AVHKILH-----MEESPHKC 481

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Osr1NP_035989.1 zf-C2H2 175..197 CDD:395048 18/21 (86%)
C2H2 Zn finger 177..197 CDD:275368 17/19 (89%)
zf-H2C2_2 189..214 CDD:463886 22/24 (92%)
C2H2 Zn finger 205..225 CDD:275368 18/19 (95%)
zf-H2C2_2 217..240 CDD:463886 21/22 (95%)
C2H2 Zn finger 233..253 CDD:275368 17/19 (89%)
sobNP_476882.1 COG5048 <389..529 CDD:227381 77/103 (75%)
C2H2 Zn finger 397..417 CDD:275368 17/19 (89%)
zf-H2C2_2 409..434 CDD:463886 22/24 (92%)
C2H2 Zn finger 425..445 CDD:275368 18/19 (95%)
zf-H2C2_2 437..460 CDD:463886 21/22 (95%)
C2H2 Zn finger 453..473 CDD:275368 17/19 (89%)