DRSC/TRiP Functional Genomics Resources

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Protein Alignment Osr1 and cbt

DIOPT Version :9

Sequence 1:NP_035989.1 Gene:Osr1 / 23967 MGIID:1344424 Length:266 Species:Mus musculus
Sequence 2:NP_722636.1 Gene:cbt / 33224 FlyBaseID:FBgn0043364 Length:428 Species:Drosophila melanogaster


Alignment Length:143 Identity:47/143 - (32%)
Similarity:70/143 - (48%) Gaps:23/143 - (16%)


- Green bases have known domain annotations that are detailed below.


Mouse   122 LALAATQEDPTKLGRGEGPGSPAGGLGALLDVTKLSPEKKPTR---GRLPSKTKKEFVCKF--CG 181
            |:..|.|:.||.:     |.:|.           :|.||..||   .:..:...:.:.|.|  ||
  Fly   223 LSTVAAQQSPTPV-----PKTPT-----------MSEEKLTTRITAAQAAATRSRIYECSFPDCG 271

Mouse   182 RHFTKSYNLLIHERTHTDERPYTC--DICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSR 244
            :::.||.:|..|:|.||.|||:.|  :.|.|.|.|.|.|..|:..|:.||.|:|..|.|.|.:|.
  Fly   272 KNYFKSSHLKAHQRVHTGERPFICKWENCDKRFSRSDELSRHKRTHTGEKKFQCSVCQKKFMRSD 336

Mouse   245 TLAVHKTLHSQVK 257
            .|:.|...|::.|
  Fly   337 HLSKHVKRHNKDK 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Osr1NP_035989.1 zf-C2H2 175..197 CDD:395048 9/23 (39%)
C2H2 Zn finger 177..197 CDD:275368 9/21 (43%)
zf-H2C2_2 189..214 CDD:404364 12/26 (46%)
C2H2 Zn finger 205..225 CDD:275368 8/21 (38%)
zf-H2C2_2 217..240 CDD:404364 9/22 (41%)
C2H2 Zn finger 233..253 CDD:275368 7/19 (37%)
cbtNP_722636.1 zf-C2H2 263..287 CDD:278523 9/23 (39%)
C2H2 Zn finger 265..287 CDD:275368 9/21 (43%)
COG5048 <270..362 CDD:227381 33/80 (41%)
zf-H2C2_2 279..306 CDD:290200 12/26 (46%)
C2H2 Zn finger 295..317 CDD:275368 8/21 (38%)
zf-H2C2_2 309..332 CDD:290200 9/22 (41%)
zf-C2H2 323..345 CDD:278523 8/21 (38%)
C2H2 Zn finger 325..345 CDD:275368 7/19 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2698
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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