| Sequence 1: | NP_035966.2 | Gene: | Lamc3 / 23928 | MGIID: | 1344394 | Length: | 1581 | Species: | Mus musculus |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_723870.1 | Gene: | wb / 43946 | FlyBaseID: | FBgn0261563 | Length: | 3375 | Species: | Drosophila melanogaster |
| Alignment Length: | 1342 | Identity: | 388/1342 - (28%) |
|---|---|---|---|
| Similarity: | 548/1342 - (40%) | Gaps: | 383/1342 - (28%) |
- Green bases have known domain annotations that are detailed below.
|
Mouse 56 RAEAS--HTCGR-PPEDFCPHVGAPGAGLQCQRCDDADPGRRHDASYLTDFHSPDDS------TW 111
Mouse 112 WQSPSMAFGVQYPTSVNLTLSLGKAYEITYVRLKFHTS-RPESFAIYKRTYASGPWEPYQYY--- 172
Mouse 173 SASCQKTY--GRPEGHYLRPGEDERVAFCTSEFSDISPLNGGNVAFSTLEGRPSAYNFEESPVLQ 235
Mouse 236 EWVTSTDILISLDRLNTFG------DDIFKDPRVLQSYYYAVSDFSVGGRCKCNGHASECEPNAA 294
Mouse 295 GQL-ACRCQHNTTGVDCERCLPFFQDRPWARGTAEDANECLPCNCSGHSEECTFDRELYRSTGHG 358
Mouse 359 GHCQRCRDHTTGPHCERCEKNYYRW--SPKT-PCQPCDCHPAGSLSLQCDNSGVCPCKPTVTGWK 420
Mouse 421 CDRCLPGFHSLSEGGCRPCACNVAGSLGTCDPRSGNCPCKENVEGSLCDRCRPGTFNLQPHNPVG 485
Mouse 486 CSSCFCYGHSKVCSPA----AGFQEHHIRSDFRHGAGGWQIRSMGVSKR---PLQWSQSGLLLGL 543
Mouse 544 RGGEEL--------SAPKKFLGDQRLSYGQ--PVILTLQVPPG---GSP---PPIQL-------- 584
Mouse 585 -----RLEGAGLALSLRPSSL------PSPQDTRQPRR------------VQLQFLLQETSEEAE 626
Mouse 627 SPLPTFHFQRLLSNLTALSIWTSGQGPGHSGQVLLCEVQLTSAWPQRELAPPASWVETCLCPQGY 691
Mouse 692 TGQFCEFCALGYKREIPHGGPY---ANCIPCTCNQH-GTCDPNTGIC-LCGHHTEGPSCERCMPG 751
Mouse 752 FYGNAFSGRADDCQPCPCP-------GQSACA-------------TIPESGDVVCTHCPPGQRGR 796
Mouse 797 RCESCEDGFFGDPLGLSGAPQP---CRRCQCSG-------------------------------- 826
Mouse 827 ----------------------------------------------NVDL-------NAVGN--- 835
Mouse 836 --CDPHSGHCLRCLYNTTGAHCEHCREGFYG-SAVATRPVD------------------------ 873
Mouse 874 ------KCAPCSCDLRGSVSEKTCNPVTGQCVCLPYVSGRDCSRCSPGFYDLQSGRGCQSCKCHP 932
Mouse 933 LGSLENKCHPKTGQCPCRPGVTGQACDRCQLGFFGFSIK-------------------------- 971
Mouse 972 ---------------------GCRDCRCSPLGAASSQCHE-NSTCVCRPGFVGYKCDRC------ 1008
Mouse 1009 -----------QDNFFLADGDTGCQ---ECPTCYALVKEEAAKLKARLMLM----------EGWL 1049
Mouse 1050 QRSDCGSPWGPLDILQGEAPLGDVYQGHHLLQETRGTFLQQM 1091 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Lamc3 | NP_035966.2 | Laminin_N | 53..278 | CDD:278484 | 69/242 (29%) |
| EGF_Lam | 279..326 | CDD:238012 | 23/47 (49%) | ||
| Laminin_EGF | 336..392 | CDD:278482 | 25/58 (43%) | ||
| EGF_Lam | 391..437 | CDD:238012 | 14/45 (31%) | ||
| Laminin_EGF | 439..486 | CDD:278482 | 23/46 (50%) | ||
| Laminin_B | 550..669 | CDD:278481 | 31/157 (20%) | ||
| EGF_Lam | 718..765 | CDD:238012 | 23/48 (48%) | ||
| EGF_Lam | 766..814 | CDD:238012 | 18/67 (27%) | ||
| Laminin_EGF | 822..>864 | CDD:278482 | 19/131 (15%) | ||
| Laminin_EGF | 878..925 | CDD:278482 | 21/46 (46%) | ||
| Laminin_EGF | 928..976 | CDD:278482 | 27/94 (29%) | ||
| EGF_Lam | 976..1022 | CDD:238012 | 18/63 (29%) | ||
| Domain II and I | 1025..1581 | 20/77 (26%) | |||
| Laminin_I | 1225..1470 | CDD:283627 | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1382..1413 | ||||
| GluZincin | 1433..>1506 | CDD:301352 | |||
| wb | NP_723870.1 | Laminin_N | 164..396 | CDD:278484 | 67/239 (28%) |
| EGF_Lam | 401..450 | CDD:238012 | 24/53 (45%) | ||
| TNFRSF | <407..507 | CDD:304602 | 46/109 (42%) | ||
| EGF_Lam | 505..552 | CDD:238012 | 16/49 (33%) | ||
| Laminin_EGF | 550..597 | CDD:278482 | 23/46 (50%) | ||
| Laminin_B | 660..798 | CDD:278481 | 28/137 (20%) | ||
| EGF_Lam | 851..900 | CDD:238012 | 23/48 (48%) | ||
| Laminin_EGF | <943..971 | CDD:278482 | 13/33 (39%) | ||
| VSP | 953..1414 | CDD:146106 | 122/481 (25%) | ||
| Laminin_EGF | 974..1018 | CDD:278482 | 3/43 (7%) | ||
| EGF_Lam | 1017..1065 | CDD:238012 | 3/47 (6%) | ||
| Laminin_EGF | 1065..>1105 | CDD:278482 | 13/40 (33%) | ||
| EGF_Lam | 1150..1197 | CDD:238012 | 22/47 (47%) | ||
| Laminin_EGF | 1199..1247 | CDD:278482 | 24/47 (51%) | ||
| EGF_Lam | 1247..1292 | CDD:238012 | 1/44 (2%) | ||
| Laminin_EGF | 1294..1342 | CDD:278482 | 14/47 (30%) | ||
| Laminin_EGF | 1340..1392 | CDD:278482 | 14/57 (25%) | ||
| Laminin_B | 1486..1611 | CDD:278481 | |||
| EGF_Lam | 1669..1716 | CDD:238012 | |||
| Laminin_EGF | 1718..1767 | CDD:278482 | |||
| EGF_Lam | 1772..1819 | CDD:238012 | |||
| CrfC | <1933..2267 | CDD:223771 | |||
| Laminin_II | 2277..2400 | CDD:283628 | |||
| LamG | 2399..>2492 | CDD:304605 | |||
| Laminin_G_2 | 2616..2755 | CDD:280389 | |||
| Laminin_G_2 | 2804..2944 | CDD:280389 | |||
| Laminin_G_2 | 3038..3169 | CDD:280389 | |||
| LamG | 3192..3347 | CDD:238058 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG1836 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.810 | |||||