| Sequence 1: | NP_035966.2 | Gene: | Lamc3 / 23928 | MGIID: | 1344394 | Length: | 1581 | Species: | Mus musculus |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001285243.1 | Gene: | NetA / 32398 | FlyBaseID: | FBgn0015773 | Length: | 726 | Species: | Drosophila melanogaster |
| Alignment Length: | 756 | Identity: | 241/756 - (31%) |
|---|---|---|---|
| Similarity: | 345/756 - (45%) | Gaps: | 168/756 - (22%) |
- Green bases have known domain annotations that are detailed below.
|
Mouse 34 CYDGVGRAQRCLPEFENAAFGRRAEASHTCGRP-PEDFCPHVGAPGAGLQCQRCDDADPGRRHDA 97
Mouse 98 SYLTDFHSPDDSTWWQS-PSMAFGVQYPTSVNLTLSLGKAYEITYVRLKF--HTSRPESFAIYKR 159
Mouse 160 TYASGPWEPYQYYSASCQKTYGRP----EGHYLRPGEDERVAFCTSEFSDISPLNGGNVAFSTLE 220
Mouse 221 GRPSAYNFEESPVLQEWVTSTDILISLDRLNTFGDDIFKDPRVLQS------------------- 266
Mouse 267 ----------------------YYYAVSDFSVGGRCKCNGHASECEPNAAGQLACRCQHNTTGVD 309
Mouse 310 CERCLPFFQDRPWARGTAEDANECLPCNCSGHSEECTFDRELYR-STG-HGGHCQRCRDHTTGPH 372
Mouse 373 CERCEKNYYRWSPK-----TPCQPCDCHPAGSLSLQCDN-SGVCPCKPTVTGWKCDRCLPGFHSL 431
Mouse 432 SEGGCRPCACNVAGSLGTCDPRSGNCPCKENVEGSLCDRCRPGTFNLQPHNPVGCSSCFCYGHSK 496
Mouse 497 VCSPAAGF--QEHHIRSDFRHGAGGWQIRSMGVSKRPLQWS----QSGLLLGLRGGEELSAPKKF 555
Mouse 556 LGDQRLSYGQPVILTL---QVPPGGSPPPIQ--LRLEGAGLALSLRPSSLPSPQDTRQPR---RV 612
Mouse 613 QLQFLLQETSEEAESPLPTFHFQRLLSNLTALSIWTSGQGPGHSGQVLLCEVQLTSAWPQRELAP 677
Mouse 678 PASWVETCLCPQGYTGQFCEFCALGYKREIPHG----GPYA 714 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Lamc3 | NP_035966.2 | Laminin_N | 53..278 | CDD:278484 | 90/273 (33%) |
| EGF_Lam | 279..326 | CDD:238012 | 33/46 (72%) | ||
| Laminin_EGF | 336..392 | CDD:278482 | 25/62 (40%) | ||
| EGF_Lam | 391..437 | CDD:238012 | 22/46 (48%) | ||
| Laminin_EGF | 439..486 | CDD:278482 | 7/46 (15%) | ||
| Laminin_B | 550..669 | CDD:278481 | 23/126 (18%) | ||
| EGF_Lam | 718..765 | CDD:238012 | |||
| EGF_Lam | 766..814 | CDD:238012 | |||
| Laminin_EGF | 822..>864 | CDD:278482 | |||
| Laminin_EGF | 878..925 | CDD:278482 | |||
| Laminin_EGF | 928..976 | CDD:278482 | |||
| EGF_Lam | 976..1022 | CDD:238012 | |||
| Domain II and I | 1025..1581 | ||||
| Laminin_I | 1225..1470 | CDD:283627 | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1382..1413 | ||||
| GluZincin | 1433..>1506 | CDD:301352 | |||
| NetA | NP_001285243.1 | LamNT | 44..280 | CDD:214532 | 89/257 (35%) |
| EGF_Lam | 312..357 | CDD:238012 | 31/44 (70%) | ||
| EGF_Lam | 369..426 | CDD:238012 | 24/56 (43%) | ||
| EGF_Lam | 431..479 | CDD:238012 | 22/48 (46%) | ||
| NTR_netrin-1_like | 545..723 | CDD:239634 | 36/197 (18%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 1 | 0.960 | - | - | ||
| 2 | 1.870 | |||||