DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fbln5 and frac

DIOPT Version :9

Sequence 1:NP_001348916.1 Gene:Fbln5 / 23876 MGIID:1346091 Length:461 Species:Mus musculus
Sequence 2:NP_001137905.1 Gene:frac / 38850 FlyBaseID:FBgn0035798 Length:1618 Species:Drosophila melanogaster


Alignment Length:385 Identity:127/385 - (32%)
Similarity:169/385 - (43%) Gaps:88/385 - (22%)


- Green bases have known domain annotations that are detailed below.


Mouse    30 LPHPGNAQQQCTN-----------GFD---LDRQSGQCLDIDECRTIPEACRGDMMCVNQNGGYL 80
            |.:.|..||.|.|           |::   ||...|.|.|||||......|...|:|.|.||.|.
  Fly   637 LVNNGGCQQVCRNLPGSYGCICAAGYELLKLDGIRGYCFDIDECSQRTHGCSDQMLCENLNGSYT 701

Mouse    81 CIPRTNPVYRGPYSNPYSTSYSGPYPAAAPPVPASNYPTISRPLVCRFGYQMDEGNQCVDVDECA 145
            |:  ..|.|.....|...||.:            |::.|.|.      ..:....:.|:|:|||:
  Fly   702 CL--CPPGYALGLDNHIVTSLN------------SSFITDST------SSETPSAHTCLDIDECS 746

Mouse   146 TDSHQCNPTQICINTEGGYTCSCTDGYWLLEGQ--CLDIDEC--RYGYCQQLCANVPGSYSCTCN 206
            ..:..|  :..|.|..||:.|:|..||.|.|..  |.|||||  ..|.|.|||.|.||.::|.|.
  Fly   747 LANGNC--SHFCQNEPGGFQCACPLGYALSEDMRTCQDIDECLDSNGQCSQLCLNQPGGFACACE 809

Mouse   207 PGFTLNDDGRSCQDVNECETE-NPCVQTCVNTYGSFICRCDPGYELEEDGIHCSDMDECS-FSEF 269
            .||.|..||..|.|::||..: ..|...|:|..|:..|.|:.||||.:|.:.|.|:|||: ....
  Fly   810 TGFELTPDGFGCADIDECSQDYGNCSDICINLLGTHACACERGYELAKDKLSCLDVDECAGLLSG 874

Mouse   270 LCQHECVNQPGSYFCSCPPGYVLLDDNRSCQ---------------------------------- 300
            .|.|||:|:.|::.|.||.||:|.||.|||.                                  
  Fly   875 GCSHECINKAGTFECGCPLGYILNDDGRSCSPALVGCPPGTQRSADGCAPIECNPGYTLGSDDKC 939

Mouse   301 -DINECEHRNHTCTSLQTCYNLQGGFKCIDPISCEEPYLLIGENR-CM----CPAEHTSC 354
             ||:||:.:|..|:  ..|.|.:|.|||    ||...|.|..:.: |.    |..:.|||
  Fly   940 VDIDECQKQNGGCS--HRCSNTEGSFKC----SCPPGYELDSDQKTCQDIDECDQDKTSC 993

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fbln5NP_001348916.1 vWFA <134..178 CDD:320736 16/43 (37%)
cEGF 200..223 CDD:315355 9/22 (41%)
EGF_CA 220..258 CDD:214542 14/38 (37%)
FXa_inhibition 271..299 CDD:317114 15/27 (56%)
fracNP_001137905.1 FXa_inhibition 296..331 CDD:291342
cEGF 396..415 CDD:289433
FXa_inhibition 425..458 CDD:291342
FXa_inhibition 476..505 CDD:291342
vWFA <550..586 CDD:294047
FXa_inhibition 596..630 CDD:291342
FXa_inhibition 636..>664 CDD:291342 7/26 (27%)
EGF_CA 676..715 CDD:284955 15/40 (38%)
FXa_inhibition 745..780 CDD:291342 12/36 (33%)
FXa_inhibition 786..821 CDD:291342 16/34 (47%)
FXa_inhibition 827..862 CDD:291342 12/34 (35%)
FXa_inhibition 874..904 CDD:291342 15/29 (52%)
FXa_inhibition 945..980 CDD:291342 13/40 (33%)
CCP 1110..1170 CDD:153056
CCP 1183..1235 CDD:153056
DUF5011 1468..1536 CDD:295940
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24034
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.970

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