DRSC/TRiP Functional Genomics Resources

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Protein Alignment Def8 and Plekhm1

DIOPT Version :10

Sequence 1:NP_001401209.1 Gene:Def8 / 23854 MGIID:1346331 Length:499 Species:Mus musculus
Sequence 2:NP_611639.1 Gene:Plekhm1 / 37520 FlyBaseID:FBgn0034694 Length:720 Species:Drosophila melanogaster


Alignment Length:474 Identity:126/474 - (26%)
Similarity:200/474 - (42%) Gaps:103/474 - (21%)


- Green bases have known domain annotations that are detailed below.


Mouse    77 HHEQEPSEKV-TSEDTLPELPAGEP--EFHYSERMMDLGLSEDHFSRPVGLFLASDVQQLRQAIE 138
            :.||...:|. |:|....|.|:|..  ....|.|.||.....|                      
  Fly   280 NEEQTGGDKAETNETAEQEAPSGSKTRSRKKSNRQMDSSSFAD---------------------- 322

Mouse   139 ECKQVILELPEQSEKQKDAVVRLIHLRLKLQELK----DPNEEEPNIRVLLEHRFYKEKSKSVKQ 199
                :.||.|....:..:::..|:..... .:|:    .|.||      |...||: ::|.||..
  Fly   323 ----LDLEAPSLLPQGSNSLSNLMQTSWS-GDLEATPTSPTEE------LTGSRFF-QRSVSVSS 375

Mouse   200 -------TCDKC--NTII------------WGLIQTWYTCTGCCYRCHSKCLNLI-----SKPCV 238
                   |.|:|  |.::            |.  :.|..     :|..:..||:.     :.|.:
  Fly   376 SVSLRSPTTDRCSYNALLRKHESNRESGAGWS--EIWEK-----FRASASNLNVAQPQRDTDPPI 433

Mouse   239 SSKVSH------QAEYEL---------------NICP---ETGLDSQDYRCAECRAPISLRGVPS 279
            |..:|.      .:|:||               .:|.   |.|||:|.:.|..|:.|:.: |. |
  Fly   434 SEDLSDLQSLDTNSEFELLTSEFDMVELQQMVAQLCQLAREPGLDAQGFLCKSCQHPLGI-GY-S 496

Mouse   280 EARQCDYTGQYYCSHCHWNDLAVIPARVVHNWDFEPRKVSRCSMRYLALMVSRPVLRLREINPLL 344
            ..:.|.::|.|||:.|...::.:||||:::||||....||:.:..:||...|.|.|.::.:||.:
  Fly   497 NFQVCAFSGSYYCNSCMDVEMQLIPARIIYNWDFRKYSVSKRAATFLAEFRSHPFLDMQLLNPRI 561

Mouse   345 FNYVEELVEIRKLRQDILLMKPYFITCKEAMEARLLLQLQDRQHFVENDEMYSIQDLLEVHMGRL 409
            :...:.:.|::.||..:..::.|..||..:....|..|...|::..|:..:|||.||..:..|.|
  Fly   562 YFASDAMAELQSLRIRLNFIRAYLYTCAPSSIELLQNQFAGREYLYEHIHLYSIADLALIQRGVL 626

Mouse   410 SCSLTEIHTLFAKHIKLDCERCQAKGFVCELCKEGDVLFPFD-SHTSVCNDCSAVFHRDCYYDNS 473
            ...|.:...|...|: |.|..|..|||:||:|:...||:||. |.|..|..|.||||.:| .:..
  Fly   627 CQQLQKAFKLGEAHV-LKCRLCHLKGFICEICQSPRVLYPFHISTTFRCLACGAVFHAEC-LNEK 689

Mouse   474 TTCPKCARLTLRKQSLFQE 492
            ..||||.|:..|:....||
  Fly   690 QPCPKCERIRKREDQGLQE 708

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Def8NP_001401209.1 C1_DEF8 182..242 CDD:410369 17/85 (20%)
zf-RING_9 282..482 CDD:464030 69/200 (35%)
Plekhm1NP_611639.1 RUN_PLEKHM1 20..191 CDD:439041
zf-RING_9 500..700 CDD:464030 70/201 (35%)
Blue background indicates that the domain is not in the aligned region.

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