Sequence 1: | NP_001359169.1 | Gene: | Apc2 / 23805 | MGIID: | 1346052 | Length: | 2317 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001263046.1 | Gene: | Apc / 44642 | FlyBaseID: | FBgn0015589 | Length: | 2417 | Species: | Drosophila melanogaster |
Alignment Length: | 2555 | Identity: | 662/2555 - (25%) |
---|---|---|---|
Similarity: | 954/2555 - (37%) | Gaps: | 783/2555 - (30%) |
- Green bases have known domain annotations that are detailed below.
Mouse 228 AQHIRSLMEERFGTSDEMVQRAQIRASRLEQIDKELLEAQDRVQQTEPQALLAVKPVAVEEEQEA 292
Mouse 293 EVPTHP-----EDGTPQPG--------------------------NSKVEVVFWLLSMLATRDQE 326
Mouse 327 DTARTLLAMSSSPESCVAMRRSGCLPLLLQILHGTEAGSVGRAGIPGAPGAKDARMRANAALHNI 391
Mouse 392 VFSQPDQGLARKEMRVLHVLEQIRAYCETCWDWLQARDSGTESGTGDTPVPIEPQICQATCAVMK 456
Mouse 457 LSFDEEYRRAMNELGGLQAVAELLQVDYEMH-KMTRDPLNLALRRYAGMTLTNLTFGDVANKATL 520
Mouse 521 CARRGCMEAIVAQLGSESEELHQVVSSILRNLSWRADINSKKVLREVGSMTALMECVLRASKEST 585
Mouse 586 LKSVLSALWNLSAHSTENKAAICQVDGALGFLVSTLTYRCQGNSLAVIESGGGILRNVSSLIATR 650
Mouse 651 EDYRQVLRDHNCLQTLLQHLTSHSLTIVSNACGTLWNLSARSPRDQELLWDLGAVGMLRNLVHSK 715
Mouse 716 HKMIAMGSAAALRNLLAHRPA---KYQAAAMAVSPG-TCVPSLYVRKQRALEAELDTRHLVHALG 776
Mouse 777 HLE---KQSLPEAETTSKK-PLPPLRHLDGLVQD------YASDSGCFDDDDAPSLAAAATTAEP 831
Mouse 832 ASPAVMSMFLGGPFLQGQALARTPPARQGGLEAEKEAGGEAAVAAKAKAKLALAVARIDRLVEDI 896
Mouse 897 SALHTSSDD--SFSLSSGDPGQEAPREGRAQSCSPCRGTEGGRR-----------EAGSRAHPLL 948
Mouse 949 RLKAAHTSLSNDSLNSGSTSDGYCTREHMTPCPLAALAEHRDDPVRGQTRPSRLDLDLPSRAELP 1013
Mouse 1014 ARDTAATDARVRTIKLSPTYQHVPLLDGAAGAGVRPLVGPGTS-PGARKQAWIP----ADSLSKV 1073
Mouse 1074 PEKLVASPLPIASKVLQKLVAQDG-PMSLSRCSSLSSLSSTGHAVPSQA---ENLDSDSSLEGLE 1134
Mouse 1135 --EAGPGEAELGRAWRASGSTSLPVSIPAPQRGRSRGLGVEDATPSSSSENCVQETPLVLSRCSS 1197
Mouse 1198 VSSLGSFESRSIA-----SSIPSDPCSGLGSGTVSPSELPDSPGQTMPPSRSKTPPAPPGQ---- 1253
Mouse 1254 -PETSQFSLQWESYVKRFLDIADCRERCQPPSELDAGSVRFTVEKPDENFSCASSLSALALHE-- 1315
Mouse 1316 ----LYVQQDVELRLRPPACPERAVGGGGHRRRDEAASRL-------------------DGPA-- 1355
Mouse 1356 ---PAGSR----ARSATD-KELEA----------------------------LRECLGAAMPARL 1384
Mouse 1385 RKVAS----ALVPGRRSLP--VPVYMLVPAPARGDDSGTDSAEGTPVNFSSAASLSDET----LQ 1439
Mouse 1440 GPS---RDKPAGPGDRQKPTGRAAPARQTRSHRPK-------------------------AAGAG 1476
Mouse 1477 KSTEHTRGPCRNRAGLELPLSRP-----------------------QSARSNRDSSCQTRTRGDG 1518
Mouse 1519 ALQSLCLTTPTEEAVYCFYDSDEEPPATA-----------------PPPRRASAIPRAL------ 1560
Mouse 1561 -----------KREKPAGRKETPSRAAQPA-----TLPVRAQPRLIVDET----PPCYSL--TSS 1603
Mouse 1604 ASSLSEPEAP--EQPANHARGPEQGSKQDSS----PSP-RAEEELLQRCISLAMPRRRT------ 1655
Mouse 1656 ---QVPGSR------RRKPRALRSDIRPT------EITQKCQEEVAGS-----DPASDLDSVEWQ 1700
Mouse 1701 AIQ---------------------EGANSIVTW-------------LHQAA---AKASL-EASSE 1727
Mouse 1728 SDSLLSLVSGVSAGSTLQPSKLRKGRKPAAEAGGAWRPEKRGTTSTKINGSPRLPNGPEKAKGTQ 1792
Mouse 1793 KMMAGE----STMLRGRTVIYSAGPAS------------RTQSKGISGPCTTPKKT--------- 1832
Mouse 1833 -------GTSGT----------TQPETVTKA-PSPEQQRSRSLHRPGKISELAALRHPPRSA--- 1876
Mouse 1877 ----------TPPA--------------------------RLAKTPSSSSSQTSPASQPL----- 1900
Mouse 1901 ------------PRRSPLATPTGGPLPGPG-GSLVPKSPARALLAKQHKT--------QKSPVRI 1944
Mouse 1945 PFMQRPARRVPPPLARPSPEPGSRGRAGAE-------GTPGARGSRLGLVRMASARSSGSESSDR 2002
Mouse 2003 SGFRRQLTFIKESPGLLRRRRSELSSADSTASTSQAASPRRGRPALPAVFLCSSRCDELRVSPRQ 2067
Mouse 2068 PLAAQRSPQAKPGLAPRAPRRTSSESPSRLPVRASPGRPETVKRYASLPHISVSRRSDSAVSVPT 2132
Mouse 2133 TQANATRRGSDGEARPLPRVAPPGTTWRRIKDEDVPHILRSTLPATALPLRVSSPEDSPAGTPQR 2197
Mouse 2198 KT-----------SDAVVQTEDVATSKTN------------SSTSPSLESRDP---PQAPASGPV 2236
Mouse 2237 APQGSDVDGPVLTKPPASAPFPHEGLSAVIAG-----FPTSR-----HGSPSRAARVPPFNYVPS 2291
Mouse 2292 PMAAATMASDSAVEKAPVSS 2311 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Apc2 | NP_001359169.1 | APC_N_CC | 43..94 | CDD:374728 | |
Suppressor_APC | 161..242 | CDD:371516 | 5/13 (38%) | ||
APC_rep | 394..467 | CDD:376216 | 27/72 (38%) | ||
armadillo repeat | 466..509 | CDD:293788 | 19/43 (44%) | ||
armadillo repeat | 517..554 | CDD:293788 | 20/36 (56%) | ||
armadillo repeat | 563..596 | CDD:293788 | 17/32 (53%) | ||
armadillo repeat | 604..645 | CDD:293788 | 23/40 (58%) | ||
ARM | 650..690 | CDD:214547 | 28/39 (72%) | ||
armadillo repeat | 654..688 | CDD:293788 | 24/33 (73%) | ||
armadillo repeat | 696..732 | CDD:293788 | 23/35 (66%) | ||
Arm_APC_u3 | 733..979 | CDD:374686 | 57/272 (21%) | ||
APC_r | 1178..1201 | CDD:368672 | 9/22 (41%) | ||
APC_r | 1290..1311 | CDD:368672 | 10/20 (50%) | ||
PHA03247 | <1328..1665 | CDD:223021 | 99/521 (19%) | ||
APC_r | 1413..1435 | CDD:368672 | 7/21 (33%) | ||
PHA03247 | <1548..1987 | CDD:223021 | 126/652 (19%) | ||
APC_basic | 1800..2125 | CDD:368684 | 80/435 (18%) | ||
PTZ00449 | <2042..2239 | CDD:185628 | 49/222 (22%) | ||
Apc | NP_001263046.1 | ARM | 222..316 | CDD:237987 | 42/106 (40%) |
armadillo repeat | 258..332 | CDD:293788 | 34/89 (38%) | ||
ARM | 332..448 | CDD:237987 | 56/119 (47%) | ||
armadillo repeat | 369..403 | CDD:293788 | 12/33 (36%) | ||
armadillo repeat | 411..448 | CDD:293788 | 20/36 (56%) | ||
armadillo repeat | 498..539 | CDD:293788 | 23/40 (58%) | ||
ARM | 506..624 | CDD:237987 | 76/117 (65%) | ||
armadillo repeat | 548..582 | CDD:293788 | 24/33 (73%) | ||
armadillo repeat | 590..624 | CDD:293788 | 21/33 (64%) | ||
APC_crr | 837..860 | CDD:283553 | 8/43 (19%) | ||
APC_crr | 903..927 | CDD:283553 | 12/36 (33%) | ||
APC_crr | 1066..1090 | CDD:283553 | 11/25 (44%) | ||
APC_crr | 1247..1271 | CDD:283553 | 8/23 (35%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167837314 | |
Domainoid | 1 | 1.000 | 190 | 1.000 | Domainoid score | I3266 |
eggNOG | 1 | 0.900 | - | - | E1_KOG2122 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 548 | 1.000 | Inparanoid score | I1140 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0002986 | |
OrthoInspector | 1 | 1.000 | - | - | mtm8887 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_105450 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR12607 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X2812 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
13 | 12.750 |