DRSC/TRiP Functional Genomics Resources

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Protein Alignment PRKD3 and MPS1

DIOPT Version :9

Sequence 1:NP_005804.1 Gene:PRKD3 / 23683 HGNCID:9408 Length:890 Species:Homo sapiens
Sequence 2:NP_010256.2 Gene:MPS1 / 851533 SGDID:S000002186 Length:764 Species:Saccharomyces cerevisiae


Alignment Length:759 Identity:168/759 - (22%)
Similarity:277/759 - (36%) Gaps:226/759 - (29%)


- Green bases have known domain annotations that are detailed below.


Human   179 VRQGLKCEGCGLNYHKRCA--FKIPNNCS--GVRKRRLSNVSLPGPGLSVPR-PLQP----EYVA 234
            :||.:| |.....|.:|.:  |.|.|..:  |..||.::..::...  .||. |.||    |.|.
Yeast   136 LRQNMK-EDITAKYAERRSKRFLISNRTTKLGPAKRAMTLTNIFDE--DVPNSPNQPINARETVE 197

Human   235 LPSEESH-VHQEPSKRIPSWSG------RPIWMEKMVMCRVKVPHTFAVHSYTRPTICQYCKR-- 290
            ||.|:|| .:.:.:||...:..      .||                           ||.|:  
Yeast   198 LPLEDSHQTNFKETKRNTDYDSIDFGDLNPI---------------------------QYIKKHN 235

Human   291 -------LLKGLF--RQGMQCKDCKFNCHKRCASKVPRDCLGEVTFNGEPSSLGTDTDIPMDIDN 346
                   |:..::  :|..:.:......|   :|:       |:.:....||        ..:.:
Yeast   236 LPTSDLPLISQIYFDKQREENRQAALRKH---SSR-------ELLYKSRSSS--------SSLSS 282

Human   347 NDI--NSDSSRGLDDTEEPSPPEDKMFFLDPSDLDVERD-EEAVKTISPSTSNNIPLMRVVQSIK 408
            |::  |.|:|...::..:|............|.:::.|. :|.:.| |.:::.|.|:.::.:.|.
Yeast   283 NNLLANKDNSITSNNGSQPRRKVSTGSSSSKSSIEIRRALKENIDT-SNNSNFNSPIHKIYKGIS 346

Human   409 HTKRKSSTM--VKEGWMVHYTSRDNLRKRHYWRLDSKCLTLFQNESGSKYYKEIPLSEILRISSP 471
            ..|...|..  |.....::....|||.::...||.........||                    
Yeast   347 RNKDSDSEKREVLRNISINANHADNLLQQENKRLKRSLDDAITNE-------------------- 391

Human   472 RDFTNISQGSNPHCFEIITDTMVYFVGENNGDSSHNPVLAATGVGLDVAQSWEKAIRQALMPVTP 536
                ||:.          .:..|::         |.|.                    ...|||.
Yeast   392 ----NINS----------KNLEVFY---------HRPA--------------------PKPPVTK 413

Human   537 QASVCTSPGQGKDHKDLSTSISVSNCQIQENVDISTV--YQIFADEVLGSGQFGIVYGGKHRKTG 599
            :..: ..|.:         |.|:||     |.:|.||  .|....|:||.|....||  |.:.:|
Yeast   414 KVEI-VEPAK---------SASLSN-----NRNIITVNDSQYEKIELLGRGGSSRVY--KVKGSG 461

Human   600 RDV-AIKVIDKMRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD-MLEM 662
            ..| |:|.:....|........:.|:.:|:.|            :..:||..:::...|| :|.:
Yeast   462 NRVYALKRVSFDAFDDSSIDGFKGEIELLEKL------------KDQKRVIQLLDYEMGDGLLYL 514

Human   663 ILS----------SEKSRLP--ERITKFMVTQILVALRNLHFKNIVHCDLKPENVLLASAEPFPQ 715
            |:.          :::|.:|  ....:|...::|:.::.:|...|||.||||.|.:|...    .
Yeast   515 IMECGDHDLSQILNQRSGMPLDFNFVRFYTKEMLLCIKVVHDAGIVHSDLKPANFVLVKG----I 575

Human   716 VKLCDFGFARIIGEKS---FRRSVVGTPAYLAPEVLRSKGY---------------NRSLDMWSV 762
            :|:.|||.|..:.|.:   :|.:.:|||.|:|||.|.:..|               .|..||||.
Yeast   576 LKIIDFGIANAVPEHTVNIYRETQIGTPNYMAPEALVAMNYTQNSENQHEGNKWKVGRPSDMWSC 640

Human   763 GVIIYVSLSGTFPFNEDEDINDQIQNAAFMYP----PNPWREISGE-----AIDLINNLLQVKMR 818
            |.|||..:.|..|:...:..|..:   |.|.|    |.|....:.|     ||:|:...|.....
Yeast   641 GCIIYQMIYGKPPYGSFQGQNRLL---AIMNPDVKIPFPEHTSNNEKIPKSAIELMKACLYRNPD 702

Human   819 KRYSVDKSLSHPWLQDYQTWLDLREFETRIGERYIT---HESDD 859
            ||::|||.||..:||.:.....:.|...|...||.:   |.|.|
Yeast   703 KRWTVDKVLSSTFLQPFMISGSIMEDLIRNAVRYGSEKPHISQD 746

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PRKD3NP_005804.1 C1_PKD3_rpt1 145..219 CDD:410391 12/43 (28%)
C1_PKD3_rpt2 267..335 CDD:410394 10/78 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 332..371 7/40 (18%)
PH_PKD 410..534 CDD:269945 15/125 (12%)
STKc_PKD 572..831 CDD:270984 83/301 (28%)
MPS1NP_010256.2 PKc_Mps1 439..716 CDD:271033 81/297 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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