DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PRKD3 and ppk16

DIOPT Version :9

Sequence 1:NP_005804.1 Gene:PRKD3 / 23683 HGNCID:9408 Length:890 Species:Homo sapiens
Sequence 2:NP_594821.1 Gene:ppk16 / 2543567 PomBaseID:SPAC890.03 Length:672 Species:Schizosaccharomyces pombe


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PRKD3NP_005804.1 C1_PKD3_rpt1 145..219 CDD:410391
C1_PKD3_rpt2 267..335 CDD:410394
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 332..371
PH_PKD 410..534 CDD:269945
STKc_PKD 572..831 CDD:270984
ppk16NP_594821.1 S_TKc 31..279 CDD:214567
STKc_AMPK-like 31..278 CDD:270905
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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