DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PRKD3 and ire1

DIOPT Version :9

Sequence 1:NP_005804.1 Gene:PRKD3 / 23683 HGNCID:9408 Length:890 Species:Homo sapiens
Sequence 2:NP_593384.1 Gene:ire1 / 2542776 PomBaseID:SPAC167.01 Length:1072 Species:Schizosaccharomyces pombe


Alignment Length:1040 Identity:204/1040 - (19%)
Similarity:328/1040 - (31%) Gaps:397/1040 - (38%)


- Green bases have known domain annotations that are detailed below.


Human   103 FGMYDK---------ILLFRHDMNS----ENILQLITSADEIHEGDLVEVVLSALATVEDFQIRP 154
            |..:||         :.||....:|    :.:|:|.::.:...|..|....:  :|||:.     
pombe    35 FNYFDKRTNGKANNELALFSPTADSPSSVDGVLELPSAENVFAESSLYNAFI--VATVDG----- 92

Human   155 HTLYVHSYKAPTFCDYCGEMLWGLVRQGLKCEGCGLNYHKRCAFKIPNNCSGVRKRRLSNVSLPG 219
               .:|||...|     |:.||.|....    ..||:|.|.                 .|..|..
pombe    93 ---SLHSYDRIT-----GQELWSLFTNA----NPGLSYTKD-----------------ENSLLSS 128

Human   220 PGLSVPRPLQPEYVALPSEESHVHQEPSKRIPSWS-GRPIWMEKMVMCRVKVPHTFAVHSYTRPT 283
            ..||     |..:.:..|.....:.:.:..|...| ...:|..:.:...:               
pombe   129 KFLS-----QSNFKSYNSTHGEFYSDSTLNISYLSDDDTVWFVEPIDGGI--------------- 173

Human   284 ICQYCKRLLKGLFRQGMQCKDCKFNCHKRCASKVPRDCLGEVTFNGEPSSLGTDTDIPMDIDNND 348
              .|...|..||.|.....||        .....|...|....|.|..::    |...:|:.|.|
pombe   174 --LYAFNLQTGLVRLPHSIKD--------LVHASPIRLLNNNVFVGSKNT----TLFTIDVSNGD 224

Human   349 I-------------NSDSSRGLDDTEEPSPPEDKMFFLDPS--------DL-------------- 378
            |             :|..:.|......||..:..:.|.|||        ||              
pombe   225 IVSQYPSGHRYETHHSVHNLGTKRDSVPSGADSDLSFKDPSGKKLSESLDLLDDFNYQVTVSNKS 289

Human   379 --DVERDEEAVKTISPS-------------TSN-------------------------------- 396
              |:.|.|..:...|.|             |.|                                
pombe   290 FVDIARTEYFITIYSDSNVILDLVYIDWTPTKNEIMYESFHSSSFDSKLALSSYDSSLHIVDTHS 354

Human   397 -----NIPLMRV------VQSIKHTKR--KSSTMVK----------------------------- 419
                 |||||..      :.::.|.|:  ||.|..|                             
pombe   355 KFIKQNIPLMSPAATVFDIVTLPHNKKIDKSQTPAKFPTSVLLRQPIDTYLETMFPQIARNKTEH 419

Human   420 -------EGWMVHYTSRDNLRKRHYWRLDSKCLTLFQNESGSKYYK--EIPLSEILRISS----P 471
                   ..|..       :.:|||      .|.....|:...||.  .|||:.|..:.|    |
pombe   420 VYINHIGNAWFA-------MSERHY------PLVSLAPEASFLYYNGFYIPLNSIFGLHSLMATP 471

Human   472 RDFTNI-------------SQGS-----------------NP------------HCFEIITDTMV 494
            :.|..:             |:||                 ||            ..|..::.|:|
pombe   472 KPFFALPGLPGYDIPSYVESEGSTKTLPSIGKKPIPLLDPNPISSTPISITFWVIMFLSVSFTIV 536

Human   495 YFV--------------GENNGDSSHNPVLAATGVGLDVAQSWEKAIRQALM-----------PV 534
            .|.              .:.|..|.:|.:        |.::...|..|:..:           .:
pombe   537 TFFSILRIRSSEVRPLKSQKNTVSINNKI--------DTSKRRRKGKRRKRVSDEHSASSNFNEI 593

Human   535 TPQASV-------------------CTSPGQGKDHKDLSTSIS--VSNCQIQENVDIS------T 572
            ..|||.                   .|.|.|    |.|.:|:.  :....:.:|.|.|      |
pombe   594 ESQASFEQNQTLDILSENIVEIQDKSTDPLQ----KSLDSSLKSHLPEATVIQNTDGSVTVNSLT 654

Human   573 VYQIFADEVLGSGQFG-IVYGGKHRKTGRDVAIKVIDKMRFPTKQESQLRNEVAILQNL-HHPGI 635
            ||    .||:|.|..| |||.|.:.  .|:||:|.: .|.|    ......|:.:||.. :||.|
pombe   655 VY----PEVIGYGSHGTIVYRGVYE--DREVAVKRV-LMEF----YDLASREITLLQQSDNHPNI 708

Human   636 VNLECMFETPERVFVVMEKLHGDMLEMILSSEKSRLPERITK-----FMVTQILVALRNLHFKNI 695
            |...|..::.:.:::|:|....::.::|   ||....:.:.|     .::.||...:.:||..::
pombe   709 VRYYCKQKSDQFLYIVIELCKCNLSDLI---EKPIAYDDLFKSIDLVSLLYQIAFGVSHLHSLDL 770

Human   696 VHCDLKPENVLLASAEPFPQVK-------LCDFGFARII--GEKSFRRS---VVGTPAYLAPEVL 748
            ||.||||:|:||. ....|.:.       :.|||.::.:  .:.|.|.:   ..|:..:.:||:|
pombe   771 VHRDLKPQNILLV-VNNSPNLSKTRVRALISDFGLSKKLDFNQSSLRNTTFEAAGSYGWRSPEIL 834

Human   749 ------------------RSKGYNRSLDMWSVGVIIYVSLS-GTFPFNEDEDINDQIQNAAF-MY 793
                              |.:..:.:.|::::|.|.|.:|: |..||....|....|....: :.
pombe   835 SGSLSQQSKEIQVKTREGRIRQASHATDIFALGCIFYYTLTGGMHPFGSHYDCEGNILKGNYCLV 899

Human   794 PPNPWREISGEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQTWLDLREFETRIGERYITHESD 858
            ......|....|.|||.:::..:..||.:::..|:||...||...||   |...:.:|:...|.|
pombe   900 HLQSLGECGVLAADLIEDMIAFEPSKRPTIEVVLNHPLFWDYAKKLD---FLIDVSDRFEVEERD 961

Human   859  858
            pombe   962  961

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PRKD3NP_005804.1 C1_PKD3_rpt1 145..219 CDD:410391 17/73 (23%)
C1_PKD3_rpt2 267..335 CDD:410394 11/67 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 332..371 9/51 (18%)
PH_PKD 410..534 CDD:269945 35/234 (15%)
STKc_PKD 572..831 CDD:270984 75/297 (25%)
ire1NP_593384.1 Luminal_IRE1_like 82..440 CDD:276097 72/440 (16%)
STKc_IRE1 652..939 CDD:270884 76/301 (25%)
S_TKc 658..938 CDD:214567 73/290 (25%)
RNase_Ire1 942..1070 CDD:199217 6/23 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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