DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PRKD3 and plo1

DIOPT Version :9

Sequence 1:NP_005804.1 Gene:PRKD3 / 23683 HGNCID:9408 Length:890 Species:Homo sapiens
Sequence 2:NP_593647.1 Gene:plo1 / 2541957 PomBaseID:SPAC23C11.16 Length:683 Species:Schizosaccharomyces pombe


Alignment Length:316 Identity:91/316 - (28%)
Similarity:161/316 - (50%) Gaps:39/316 - (12%)


- Green bases have known domain annotations that are detailed below.


Human   526 AIRQALMPVTPQ-----ASVCTSPGQGKDHKDLSTSISVSNCQIQENVDISTVYQIFADEVLGSG 585
            ||::....:||:     :.:|.:|.....:.             ::|: ..|.|     :.:|.|
pombe     5 AIKEPKTAITPKKKSKASRLCFTPPTNLHNN-------------KKNI-FYTRY-----DCIGEG 50

Human   586 QFGIVYGGKHRKTGRDVAIKVIDKMRFPT-KQESQLRNEVAILQNLHHPGIVNLECMFETPERVF 649
            .|...:..|. ..|...|.|||.|..... |.:.:|..|:.:.|::.||.||.....||....::
pombe    51 GFARCFRVKD-NYGNIYAAKVIAKRSLQNDKTKLKLFGEIKVHQSMSHPNIVGFIDCFEDSTNIY 114

Human   650 VVMEKL-HGDMLEMILSSEKSRLPERITKFMVTQILVALRNLHFKNIVHCDLKPENVLLASAEPF 713
            :::|.. |..::|::  .::.:|.|...::::.|||.||:.:|.|.::|.|||..|::|..:.  
pombe   115 LILELCEHKSLMELL--RKRKQLTEPEVRYLMMQILGALKYMHKKRVIHRDLKLGNIMLDESN-- 175

Human   714 PQVKLCDFGFARIIGEKSFRR-SVVGTPAYLAPEVL--RSKGYNRSLDMWSVGVIIYVSLSGTFP 775
             .||:.|||.|.::.:...|: ::.|||.|:|||:|  ..:|::..:|:||.||::|..|.|..|
pombe   176 -NVKIGDFGLAALLMDDEERKMTICGTPNYIAPEILFNSKEGHSFEVDLWSAGVVMYALLIGKPP 239

Human   776 FNEDE--DINDQIQNAAFMYPPNPWREISGEAIDLINNLLQVKMRKRYSVDKSLSH 829
            |.:.|  .|..:|:..::.:|.|.  :||.||.|||::||......|.|:|..:.|
pombe   240 FQDKEVKTIYRKIKANSYSFPSNV--DISAEAKDLISSLLTHDPSIRPSIDDIVDH 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PRKD3NP_005804.1 C1_PKD3_rpt1 145..219 CDD:410391
C1_PKD3_rpt2 267..335 CDD:410394
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 332..371
PH_PKD 410..534 CDD:269945 2/7 (29%)
STKc_PKD 572..831 CDD:270984 84/265 (32%)
plo1NP_593647.1 STKc_PLK 41..296 CDD:271001 84/266 (32%)
S_TKc 41..296 CDD:214567 84/266 (32%)
POLO_box_1 490..580 CDD:240561
POLO_box_2 599..676 CDD:240560
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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