DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment STX12 and Stx12

DIOPT Version :10

Sequence 1:NP_803173.1 Gene:STX12 / 23673 HGNCID:11430 Length:276 Species:Homo sapiens
Sequence 2:XP_006239128.1 Gene:Stx12 / 65033 RGDID:620977 Length:321 Species:Rattus norvegicus


Alignment Length:250 Identity:231/250 - (92%)
Similarity:242/250 - (96%) Gaps:0/250 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSYGPLDMYRNPGPSGPQLRDFSSIIQTCSGNIQRISQATAQIKNLMSQLGTKQDSSKLQENLQQ 65
            ||||||||||||||||||.|||:||||||||||||||||||||||||||||||||||||||||||
  Rat     1 MSYGPLDMYRNPGPSGPQPRDFNSIIQTCSGNIQRISQATAQIKNLMSQLGTKQDSSKLQENLQQ 65

Human    66 LQHSTNQLAKETNELLKELGSLPLPLSTSEQRQQRLQKERLMNDFSAALNNFQAVQRRVSEKEKE 130
            .||||||||||||||||||||||||||.||||||:|||||||||||:||||||.|||:|||||||
  Rat    66 FQHSTNQLAKETNELLKELGSLPLPLSASEQRQQKLQKERLMNDFSSALNNFQVVQRKVSEKEKE 130

Human   131 SIARARAGSRLSAEERQREEQLVSFDSHEEWNQMQSQEDEVAITEQDLELIKERETAIRQLEADI 195
            ||||||||||||||:|||||||||||||||||||||||:|.|||||||||||||||||:||||||
  Rat   131 SIARARAGSRLSAEDRQREEQLVSFDSHEEWNQMQSQEEEAAITEQDLELIKERETAIQQLEADI 195

Human   196 LDVNQIFKDLAMMIHDQGDLIDSIEANVESSEVHVERATEQLQRAAYYQKKSRKK 250
            ||||||||||||||||||||||||||||||||||||||::|||||||||...|::
  Rat   196 LDVNQIFKDLAMMIHDQGDLIDSIEANVESSEVHVERASDQLQRAAYYQDLRRQE 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
STX12NP_803173.1 Syntaxin_2 30..132 CDD:464199 95/101 (94%)
SNARE_syntaxin12 181..247 CDD:277229 61/65 (94%)
Stx12XP_006239128.1 Syntaxin_2 30..132 CDD:464199 95/101 (94%)
SNARE_syntaxin12 181..244 CDD:277229 59/62 (95%)

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