DRSC/TRiP Functional Genomics Resources

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Protein Alignment SSBP3 and Ssdp

DIOPT Version :10

Sequence 1:NP_663768.1 Gene:SSBP3 / 23648 HGNCID:15674 Length:388 Species:Homo sapiens
Sequence 2:NP_001262698.1 Gene:Ssdp / 42177 FlyBaseID:FBgn0011481 Length:509 Species:Drosophila melanogaster


Alignment Length:456 Identity:235/456 - (51%)
Similarity:262/456 - (57%) Gaps:102/456 - (22%)


- Green bases have known domain annotations that are detailed below.


Human     1 MFAKGKGSAVPSDGQAREKLALYVYEYLLHVGAQKSAQTFLSEIRWEKNITLGEPPGFLHSWWCV 65
            |:.|.|.||||||.|||||||||||||||||||||:||||||||||||||||||||||||:||||
  Fly     1 MYGKSKTSAVPSDAQAREKLALYVYEYLLHVGAQKAAQTFLSEIRWEKNITLGEPPGFLHTWWCV 65

Human    66 FWDLYCAAPERRDTCEHSSEAKAFHDY-------------------SAAAAPSPVLGNIPP-NDG 110
            |||||||||||||.|:|||||||||||                   :...|||| ||.:|| .||
  Fly    66 FWDLYCAAPERRDQCDHSSEAKAFHDYGFVSSGYGVNGIGPGGPHNAGGPAPSP-LGQMPPGGDG 129

Human   111 ---MPGGPIPPGFFQGPPGS--QPSP--HAQPPPHNPSSMMGPHSQPFM-SPRYAGGPRPPIR-- 165
               .||||:.|.||   |.|  :|||  ||..|...||.|| |...||| .|||.|||||.:|  
  Fly   130 GPMGPGGPMGPNFF---PNSTMRPSPPTHASSPQPPPSQMM-PGQPPFMGGPRYPGGPRPGVRMQ 190

Human   166 -MGNQ---PPGGVPGTQPLLPNSMDPTRQQGHPNMGGSMQRMNPPRGMGPMGPGPQNYG--SGMR 224
             |||:   |||     ||::||||||||..|  .||....||||||  ||.|.||..||  .|||
  Fly   191 GMGNEFNGPPG-----QPMMPNSMDPTRPGG--GMGPMNPRMNPPR--GPGGMGPMGYGGPGGMR 246

Human   225 PPPNSLGP-AMPGINMGPGAGRP--WPNPNSANSIPYSSSSPGTYVGPPGGGGP--PGTPIMPSP 284
            .|  :.|| .||.:.||...|||  |....||....|||||||.|  .||..||  |||||||||
  Fly   247 GP--APGPGGMPPMGMGGAGGRPPQWQPNASAPLNAYSSSSPGNY--GPGSNGPPGPGTPIMPSP 307

Human   285 ADSTNS------SDNIYTMINPVPPGGSRSNFPMGPGSD--------GPMGGMGGMEPHHM---- 331
            .|:|..      .|::|.::.|        .||||.|.|        |.||.||| .|:.|    
  Fly   308 QDNTQGGPVGGPGDSMYALMKP--------EFPMGGGPDGGGGGGGPGGMGPMGG-GPNSMGPVL 363

Human   332 ---NGSLGSGDIDGLPKNSPNNISGISNPPGTPRDDGELG------GNFLHSFQNDNYSPSMTMS 387
               .|..||| :||: ||||.|     ..|||||:|...|      |.|....:||....:..:.
  Fly   364 NGGGGPDGSG-LDGM-KNSPAN-----GGPGTPREDSGSGMGDYNLGGFGGPGENDQTESAAILK 421

Human   388 V 388
            :
  Fly   422 I 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SSBP3NP_663768.1 LisH 17..43 CDD:128913 24/25 (96%)
SSDP 81..365 CDD:461334 157/345 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 101..388 148/335 (44%)
SsdpNP_001262698.1 SSDP 81..393 CDD:461334 157/345 (46%)

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