DRSC/TRiP Functional Genomics Resources

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Protein Alignment BACE1 and BAR1

DIOPT Version :10

Sequence 1:NP_036236.1 Gene:BACE1 / 23621 HGNCID:933 Length:501 Species:Homo sapiens
Sequence 2:NP_012249.1 Gene:BAR1 / 854797 SGDID:S000001277 Length:587 Species:Saccharomyces cerevisiae


Alignment Length:401 Identity:97/401 - (24%)
Similarity:157/401 - (39%) Gaps:111/401 - (27%)


- Green bases have known domain annotations that are detailed below.


Human    75 YYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPF------LHRY--------------------- 112
            |...:.:|:|.|:|.:|.||||::|.|..:.:||      ...|                     
Yeast    45 YATTLDIGTPSQSLTVLFDTGSADFWVMDSSNPFCLPNSNTSSYSNATYNGEEVKPSIDCRSMST 109

Human   113 YQRQLSSTYRDLRKG-VYVPYTQGKW-EGELGTDLVSIPHG---PNVTVRANIAAITESDKFFIN 172
            |....||||:.|..| .|:.|..|.: :|..||:.||| :|   ||:.......|.|..      
Yeast   110 YNEHRSSTYQYLENGRFYITYADGTFADGSWGTETVSI-NGIDIPNIQFGVAKYATTPV------ 167

Human   173 GSNWEGILGLAYAE-------IARPDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLAS 230
                .|:||:.:..       ...|:: ..|.|..::|...:.::.:..|.     ||..:   |
Yeast   168 ----SGVLGIGFPRRESVKGYEGAPNE-YYPNFPQILKSEKIIDVVAYSLF-----LNSPD---S 219

Human   231 VGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVII-------VRVEINGQDLKMDCKEYNYDKS-- 286
            ..||::.|.||.|.::|.|:..|:..|  |..|:       :.::..|...|..|:...:..:  
Yeast   220 GTGSIVFGAIDESKFSGDLFTFPMVNE--YPTIVDAPATLAMTIQGLGAQNKSSCEHETFTTTKY 282

Human   287 --IVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVC-WQAGTTPWNI-------- 340
              ::||||:.|..||.:.:.....:.|:.|.|   :|.::   |.| ...|...:|.        
Yeast   283 PVLLDSGTSLLNAPKVIADKMASFVNASYSEE---EGIYI---LDCPVSVGDVEYNFDFGDLQIS 341

Human   341 FPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVV 405
            .|:.||.|..| |..|:                      | .||:..::...|:|.|.:...|||
Yeast   342 VPLSSLILSPE-TEGSY----------------------C-GFAVQPTNDSMVLGDVFLSSAYVV 382

Human   406 FDRARKRIGFA 416
            ||....:|..|
Yeast   383 FDLDNYKISLA 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BACE1NP_036236.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..58
beta_secretase_like 72..437 CDD:133140 97/401 (24%)
Interaction with RTN3 479..501
DXXLL. /evidence=ECO:0000269|PubMed:15886016 496..500
BAR1NP_012249.1 SAP_like 43..395 CDD:133141 97/401 (24%)
Blue background indicates that the domain is not in the aligned region.

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