DRSC/TRiP Functional Genomics Resources

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Protein Alignment BACE1 and CG10104

DIOPT Version :10

Sequence 1:NP_036236.1 Gene:BACE1 / 23621 HGNCID:933 Length:501 Species:Homo sapiens
Sequence 2:NP_610961.1 Gene:CG10104 / 36602 FlyBaseID:FBgn0033933 Length:404 Species:Drosophila melanogaster


Alignment Length:401 Identity:87/401 - (21%)
Similarity:133/401 - (33%) Gaps:128/401 - (31%)


- Green bases have known domain annotations that are detailed below.


Human   153 LDHIAENILSYLD-------AKSLCAAELVCKEWYRVTSDGM-LWKKLIERMVRTDSLWRGLAER 209
            :|.:.::||.|.:       |..|...|....|..::.||.: |.:..:|.:..|..        
  Fly     3 VDELNQSILQYKEQLEQIAQALQLTRDETERSELNKLKSDLIELLELTVESLAATSD-------- 59

Human   210 RGWGQYLFKNKPPDE--NAPP--------NSFYRALYPKIIQDIETIESNWRCGRHSLQRIHCRS 264
                    .:..||.  .|||        :.|  ||:.:.|::::|.:|  ..|..:.::.....
  Fly    60 --------DDDAPDTAGRAPPATADNPIDDEF--ALFMREIKELQTEDS--AAGEQAGEQTATEP 112

Human   265 ETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTG--------HT-GSVLCLQYDERVI 320
            |....      ||.      .||.....||..|:.   |.|        || ||.   .|...::
  Fly   113 ERQPN------DDD------ADNDDDADDKLDLDG---LVGSKCSAPHLHTWGST---AYHNAMV 159

Human   321 ITGSSD----STVRVWDVNA--GEMLNTLIHHCEAVLH---------LRFNNGMMVTCSKDRSIA 370
            .:..:|    :|.:|...|.  .|||     .|...|.         .|:::|.:|...:.|   
  Fly   160 CSLDADDLAHATAKVLFTNPTHREML-----PCAYFLEGECRFTDEKCRYSHGEVVRLDQLR--- 216

Human   371 VWDMASPTDITLRRVLVGHRA------------AVNVVDFDDKYIVSASGDRTIKVWNTSTCEFV 423
              |..:|....|||  .|.||            .|..||||.|                 .|: |
  Fly   217 --DYRAPQFERLRR--AGSRALVKQSTRLWCKGTVTEVDFDAK-----------------RCK-V 259

Human   424 RTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIEC---GACLRVLEGHEELVRCIRFDNKRIVS 485
            |...| ||....:.:.|.|.:....|......|.|.   ||...  |..:|.:|......|.:..
  Fly   260 RLEEG-KREQLEVPFEDLLPLDEDEDGQEAAEDSESDTDGADEE--EADDEALRKALLVEKSLFH 321

Human   486 GAYDGKIKVWD 496
            .|.|.::..|:
  Fly   322 PAPDRRLGEWE 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BACE1NP_036236.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..58
beta_secretase_like 72..437 CDD:133140 73/337 (22%)
Interaction with RTN3 479..501 4/18 (22%)
DXXLL. /evidence=ECO:0000269|PubMed:15886016 496..500 0/1 (0%)
CG10104NP_610961.1 pepsin_retropepsin_like 76..400 CDD:472175 69/312 (22%)
Blue background indicates that the domain is not in the aligned region.

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