DRSC/TRiP Functional Genomics Resources

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Protein Alignment BACE1 and CG17134

DIOPT Version :9

Sequence 1:NP_036236.1 Gene:BACE1 / 23621 HGNCID:933 Length:501 Species:Homo sapiens
Sequence 2:NP_609458.1 Gene:CG17134 / 34494 FlyBaseID:FBgn0032304 Length:391 Species:Drosophila melanogaster


Alignment Length:361 Identity:105/361 - (29%)
Similarity:166/361 - (45%) Gaps:49/361 - (13%)


- Green bases have known domain annotations that are detailed below.


Human    65 DNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPF------LHRYYQRQLSSTYRD 123
            :||.......||..:.:|:|.|..|||.||||:|..|.:|..|.      .|..|....||||..
  Fly    66 ENLHNSMNNEYYGVIAIGTPEQRFNILFDTGSANLWVPSASCPASNTACQRHNKYDSSASSTYVA 130

Human   124 LRKGVYVPYTQGKWEGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIA 188
            ..:...:.|..|...|.|..|:|:|. |.::..:....|::|....|:: :.:.||||||::.||
  Fly   131 NGEEFAIEYGTGSLSGFLSNDIVTIA-GISIQNQTFGEALSEPGTTFVD-APFAGILGLAFSAIA 193

Human   189 RPDDSLEPFFDSLVKQTHVPN-LFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYT 252
              .|.:.|.||:::.|..:.. :.|..|...|        .|..||.:|:||||.|||.|||.|.
  Fly   194 --VDGVTPPFDNMISQGLLDEPVISFYLKRQG--------TAVRGGELILGGIDSSLYRGSLTYV 248

Human   253 PIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEK 317
            |:....|::..:..::.||..|...|      ::|.|:||:.:.:|...:....:.:.|..:.  
  Fly   249 PVSVPAYWQFKVNTIKTNGTLLCNGC------QAIADTGTSLIAVPLAAYRKINRQLGATDND-- 305

Human   318 FPDGFWLGEQLV-CWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCY 381
                   ||..| |.:..:     .|.::|.:.|.|      .|:.|:.|:  |:.....|..|.
  Fly   306 -------GEAFVRCGRVSS-----LPKVNLNIGGTV------FTLAPRDYI--VKVTQNGQTYCM 350

Human   382 K-FAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFA 416
            . |...:..:..::|.|.:..||.|||:..:|||||
  Fly   351 SAFTYMEGLSFWILGDVFIGKFYTVFDKGNERIGFA 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BACE1NP_036236.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..58
beta_secretase_like 72..437 CDD:133140 103/354 (29%)
Interaction with RTN3 479..501
DXXLL. /evidence=ECO:0000269|PubMed:15886016 496..500
CG17134NP_609458.1 pepsin_retropepsin_like 70..386 CDD:299705 101/355 (28%)
Asp 75..388 CDD:278455 103/352 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165151464
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

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