DRSC/TRiP Functional Genomics Resources

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Protein Alignment NTSR2 and ntsr1

DIOPT Version :9

Sequence 1:NP_036476.2 Gene:NTSR2 / 23620 HGNCID:8040 Length:410 Species:Homo sapiens
Sequence 2:XP_021329279.1 Gene:ntsr1 / 569344 ZFINID:ZDB-GENE-090313-372 Length:400 Species:Danio rerio


Alignment Length:370 Identity:145/370 - (39%)
Similarity:230/370 - (62%) Gaps:43/370 - (11%)


- Green bases have known domain annotations that are detailed below.


Human    23 LGVDTRLWAKVLFTALYALIWALGAAGNALSAHVVL--KARAGRAGRLRHHVLSLALAGLLLLLV 85
            |.|:|.:::|||.|.:|.:::.:|..||:::.:.:|  |:.......:.:|:.|||::.||:|::
Zfish    44 LDVNTDIYSKVLVTVIYVVLFLIGCLGNSITLYTLLTKKSLQNLQSTVHYHLASLAISDLLILVL 108

Human    86 GVPVELYSFVWFHYPWVFGDLGCRGYYFVHELCAYATVLSVAGLSAERCLAVCQPLRARSLLTPR 150
            .:|:|||:|:|.|:||.||:..|:||||:.:.|:|||..::|.||.||.:|:|.|.:|:|:::..
Zfish   109 CMPIELYNFIWVHHPWAFGEAVCKGYYFLRDGCSYATAFNIASLSVERFMAICHPFKAKSIMSRS 173

Human   151 RTRWLVALSWAASLGLALPMAVIMGQKHELETADGEPEPASRVCTVLVSRTALQVFIQVNVLVSF 215
            ||:.|::..|.||..||.||...|||    :..:.|     .:||.:||....:..:|:|..:||
Zfish   174 RTKKLISAMWIASFFLATPMLFTMGQ----QLMNDE-----YICTTIVSSITAKTVLQLNAFLSF 229

Human   216 VLPLALTAFLNGVTVSHLLALCSQVPSTSTPGSSTPSRLELLSEEGLLSFIVWKKTFIQGGQVSL 280
            |:|:||.:.||||..|.||.:..:        |:..:|:.::                 ||..::
Zfish   230 VVPMALISALNGVIASQLLRMFRE--------SAQDNRVCII-----------------GGNATM 269

Human   281 VR-HKDVRRIRSLQRSVQVLRAIVVMYVICWLPYHARRLMYCYVPDDAWTDPLYNFYHYFYMVTN 344
            :. ..:..|.:|::..|.||||:|:.:|:|||||||||||||||.:  ||..||:||||||||||
Zfish   270 LSVAVEPNRAQSMRHGVMVLRAVVIAFVVCWLPYHARRLMYCYVTE--WTTALYDFYHYFYMVTN 332

Human   345 TLFYVSSAVTPLLYNAVSSSFRKLFLEAVSSL---CGEHHPMKRL 386
            .|||||||:.|:|||.||:::|::|...:..|   | .|...||:
Zfish   333 VLFYVSSAINPILYNLVSANYRQIFFSTLRYLILPC-RHKKQKRV 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NTSR2NP_036476.2 7tmA_NTSR2 33..369 CDD:320478 135/338 (40%)
TM helix 1 33..60 CDD:320478 8/28 (29%)
TM helix 2 68..94 CDD:320478 11/25 (44%)
TM helix 3 108..138 CDD:320478 15/29 (52%)
TM helix 4 152..170 CDD:320478 7/17 (41%)
TM helix 5 203..232 CDD:320478 12/28 (43%)
TM helix 6 290..320 CDD:320478 18/29 (62%)
TM helix 7 337..362 CDD:320478 19/24 (79%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 381..410 2/6 (33%)
ntsr1XP_021329279.1 7tmA_NTSR1 54..357 CDD:320477 135/338 (40%)
TM helix 1 54..81 CDD:320477 8/26 (31%)
TM helix 2 91..117 CDD:320477 11/25 (44%)
TM helix 3 131..161 CDD:320477 15/29 (52%)
TM helix 4 173..195 CDD:320477 10/21 (48%)
TM helix 5 217..246 CDD:320477 12/28 (43%)
TM helix 6 280..310 CDD:320477 18/29 (62%)
TM helix 7 325..350 CDD:320477 19/24 (79%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BJWF
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D225435at7742
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24243
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
54.880

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