DRSC/TRiP Functional Genomics Resources

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Protein Alignment VSIG2 and Lac

DIOPT Version :9

Sequence 1:NP_055127.2 Gene:VSIG2 / 23584 HGNCID:17149 Length:327 Species:Homo sapiens
Sequence 2:NP_523713.2 Gene:Lac / 36363 FlyBaseID:FBgn0010238 Length:359 Species:Drosophila melanogaster


Alignment Length:188 Identity:50/188 - (26%)
Similarity:78/188 - (41%) Gaps:24/188 - (12%)


- Green bases have known domain annotations that are detailed below.


Human    37 LGKTAELTCTYSTSVGDSFALEWS--FVQPGKPISESHPILYFTNGHLYPTGSKSKRVSLLQNPP 99
            :|.|.|..|:.      .:|.|::  |::     ::|.|:...|...|.   .|..|.||..:|.
  Fly    42 IGGTVEFDCSV------QYAKEYNVLFLK-----TDSDPVFLSTGSTLV---IKDSRFSLRYDPN 92

Human   100 TVGVATLKLTDVHPSDTGTYLCQVNNPPDFYTNGLGLINLTVLVPP-SNPLCSQSGQTSVGGSTA 163
            : ....|::.|:..:|.|||.|||........:  ..:.|:|..|| .:...:||...|.|....
  Fly    93 S-STYKLQIKDIQETDAGTYTCQVVISTVHKVS--AEVKLSVRRPPVISDNSTQSVVASEGSEVQ 154

Human   164 LRCSSSEGAPKPVYNWVRLGTFPTPSPGSMVQDEVSGQLILTNLSLTSSGTYRCVATN 221
            :.|.:| |.|.|...|.|......|:..:..   |...|.:.::.....|||.|||.|
  Fly   155 MECYAS-GYPTPTITWRRENNAILPTDSATY---VGNTLRIKSVKKEDRGTYYCVADN 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VSIG2NP_055127.2 V-set 31..142 CDD:311561 26/106 (25%)
Ig 164..231 CDD:319273 17/58 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 305..327
LacNP_523713.2 IG_like 36..131 CDD:214653 26/105 (25%)
FR1 37..50 CDD:409353 3/7 (43%)
Ig strand A' 37..42 CDD:409353 50/188 (27%)
Ig strand B 44..51 CDD:409353 2/6 (33%)
CDR1 51..59 CDD:409353 2/13 (15%)
Ig strand C 59..63 CDD:409353 0/3 (0%)
FR2 60..63 CDD:409353 0/2 (0%)
CDR2 67..81 CDD:409353 4/16 (25%)
Ig strand C' 68..72 CDD:409353 1/3 (33%)
Ig strand C' 79..81 CDD:409353 0/4 (0%)
FR3 84..115 CDD:409353 11/31 (35%)
Ig strand D 84..90 CDD:409353 3/5 (60%)
Ig strand E 94..102 CDD:409353 1/7 (14%)
Ig strand F 108..115 CDD:409353 4/6 (67%)
CDR3 116..124 CDD:409353 0/7 (0%)
FR4 124..130 CDD:409353 0/7 (0%)
Ig strand G 124..130 CDD:409353 0/7 (0%)
Ig_3 134..208 CDD:404760 22/77 (29%)
Ig strand B 153..157 CDD:409353 0/3 (0%)
Ig strand C 166..170 CDD:409353 0/3 (0%)
Ig strand E 187..191 CDD:409353 1/3 (33%)
Ig strand F 201..206 CDD:409353 3/4 (75%)
Ig strand G 215..218 CDD:409353
Ig 227..318 CDD:416386
Ig strand C 256..260 CDD:409353
Ig strand E 286..290 CDD:409353
Ig strand F 300..305 CDD:409353
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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