DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PSD4 and siz

DIOPT Version :10

Sequence 1:NP_036587.2 Gene:PSD4 / 23550 HGNCID:19096 Length:1056 Species:Homo sapiens
Sequence 2:NP_730594.1 Gene:siz / 40327 FlyBaseID:FBgn0026179 Length:1325 Species:Drosophila melanogaster


Alignment Length:986 Identity:206/986 - (20%)
Similarity:326/986 - (33%) Gaps:330/986 - (33%)


- Green bases have known domain annotations that are detailed below.


Human    88 QEQTRATDPPESTRQDAPPWGS--GVELTHLGSPSAQREHRQNTASP-------GSPVN------ 137
            |:|.:....|..|....|...:  |:..|......:.||.||...||       .||.:      
  Fly   407 QQQAQQQQQPRVTIMAGPAGAASPGLSRTPPTRSLSMRERRQLDCSPIPRSQSGASPASISSSTV 471

Human   138 --SHLPGSPKQNRSTSTQVVFWAGILQAQMCVLDLEEELEKTEGLKAGLKCCLPTPPVDLPGDTG 200
              |.|...|..|            :|.|      .|......:.|..|....           |.
  Fly   472 STSALASHPHVN------------LLHA------AEPHYYNAQALPQGAAYY-----------TS 507

Human   201 LHSSPPENEDSGEDSSEPEGEGQAWLR-EGTPDSSPQWGAEEESMFFSNPLFLASP-CSENSASG 263
            .|.||   .|....||.......:|:. .|....:|.:.|.:..|.........:| ||.::.||
  Fly   508 YHGSP---HDLSYASSADTSLNASWVNTSGHSPHTPYYSAAQIYMRPKGGSTTPTPSCSGSTGSG 569

Human   264 ECFSWGASDSHAGVRTGPESP-ATLEPPLPEDTVLWELESEPDLGDGAAISGHCTPPFPVPIYKP 327
            .    |.|.|.:..:..||.| .|......:.|.|..|:.:             ||| |..:.:.
  Fly   570 S----GGSGSGSSKKVPPEVPKRTSSITAQQQTQLLLLQRQ-------------TPP-PPSLLRT 616

Human   328 HSICWASVAAAEGAPAAPPGHGESEGDRLGPAPSAAPCVDEALTWESGCVGSDLGPAAHPVQPWA 392
            :.:|   ..|..|:..:....|.                |.::|.....:.||||..       .
  Fly   617 NGLC---KTAENGSLTSVQSSGS----------------DSSVTSAERNLNSDLGSD-------R 655

Human   393 SLSPEGWQRGGPFWPQVTLNSQDRDEREGGHPQESLPCTLAPCPWRSPASSPEPSSPESESRGPG 457
            |.||..|:||      ..||                             ||.:.|:..::|.|  
  Fly   656 SNSPHTWKRG------TALN-----------------------------SSQQFSTHSADSAG-- 683

Human   458 PRPSPASSQEGSPQLQHHSSGILPKWTLDASQSSLLETDGEQPSSLKKKEAGEAPKPGEEVKSEG 522
                 |.|..|        .|:.....:.|:|.        |.:......||..|          
  Fly   684 -----AVSGGG--------VGVAGGAGVYAAQM--------QAAVAAATAAGGMP---------- 717

Human   523 TARPAETGDVQPDIHLTSAEHENLRTPMNSSWLPGSPMPQAQSPEEGQRPPAGDKLANGVRNNKV 587
               ||:  |.....|.::|::|.                ..|...|.|:..|....|...:|.|:
  Fly   718 ---PAD--DHAISSHTSAAQYEQ----------------HEQQQHEQQQLQAAAAAAGVAQNYKM 761

Human   588 AWNLASRLYRL------------------EGFRKSE---VAAYLQKNNDFSRAVAEEYLSFFQ-- 629
            :..:..|.||:                  .||.::.   ||.:|......||.:..|||...|  
  Fly   762 SETIRKRQYRVGLNLFNKKPEKGITYLIRRGFLENTPQGVARFLITRKGLSRQMIGEYLGNLQNQ 826

Human   630 --------------FGGQSLDRALRSFLQALVLSGETQERERILYQFSRRFHHCNP---GIFPSV 677
                          ..|:.:|.|||.|.....:.||.|:.||::..||:|:..||.   |...|.
  Fly   827 FNMAVLSCFAMELDLSGRQVDVALRKFQAYFRMPGEAQKIERLMEIFSQRYCECNADIVGRLRSS 891

Human   678 DSVHTLTCAIMLLNTDLHGQNI--GKSMSCQEFITNLNGLRDGGNFPKELLKALYWSIRSEKLEW 740
            |::..|..||::||||||..|:  .:.|..::||.||.|:.|..:..|::|..:|..::|:  |:
  Fly   892 DTIFVLAFAIIMLNTDLHTPNLKPERRMRVEDFIKNLRGIDDCHDIDKDMLMGIYDRVKSD--EF 954

Human   741 AVDEEDTARPEKAQPSLPAGKMSKPFLQLAQDPTVPTYKQGILARKMHQ--DADGKKTPW-GKRG 802
            ....:...:..|.|.:: .||  ||.|.|       .:::.:...::::  |.:.|:.|. .:|.
  Fly   955 KPGSDHVTQVMKVQATI-VGK--KPNLAL-------PHRRLVCYCRLYEIPDVNKKERPGVHQRE 1009

Human   803 WKMFHTLL---------RGMVLYFLKQGEDHCLEGESLVGQMVDEPVGVHHSLATPATHYTKKPH 858
            ..:|:.||         :..|.|..:.....|    ..|..::|.|            :|   |.
  Fly  1010 VFLFNDLLVITKIFSKKKTSVTYTFRNSFPLC----GTVVTLLDMP------------NY---PF 1055

Human   859 VFQL-RTADWRLYL-FQAPT-------AKEMSSWIARIN-------------LAAATHSAP---- 897
            ..|| :..|.::.: |.|..       |:::...|:.::             ..:|.:.||    
  Fly  1056 CIQLSQKVDGKILITFNARNEHDRCKFAEDLKESISEMDEMESLRIEAELERQKSARNRAPGNAE 1120

Human   898 ------------PFPAAVGSQRRFVRPILPVGPAQSSLEEQHRSHENC----LDAAADDLLDLQR 946
                        |.|...||              |:|.|:...|.:|.    ..|.::.|||:..
  Fly  1121 NRDSGVADVEVCPCPYQQGS--------------QASGEQAPNSADNSQQLKRSALSNSLLDMHE 1171

Human   947 NL----PERRG 953
            ..    |:|||
  Fly  1172 QFGNEKPQRRG 1182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PSD4NP_036587.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 25..71
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 87..149 19/77 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 195..239 10/44 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 340..362 2/21 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 388..533 26/144 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 546..581 5/34 (15%)
Sec7 570..738 CDD:238100 59/209 (28%)
PH_EFA6 772..900 CDD:270107 26/177 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1004..1056
sizNP_730594.1 Sec7 766..954 CDD:460178 54/189 (29%)
PH_IQSEC 981..1108 CDD:270128 22/145 (15%)
Blue background indicates that the domain is not in the aligned region.

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