DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TNPO3 and tnpo3

DIOPT Version :10

Sequence 1:NP_001369145.1 Gene:TNPO3 / 23534 HGNCID:17103 Length:957 Species:Homo sapiens
Sequence 2:NP_957381.1 Gene:tnpo3 / 394062 ZFINID:ZDB-GENE-040426-708 Length:923 Species:Danio rerio


Alignment Length:957 Identity:792/957 - (82%)
Similarity:870/957 - (90%) Gaps:34/957 - (3%)


- Green bases have known domain annotations that are detailed below.


Human     1 MEGAKPTLQLVYQAVQALYHDPDPSGKERASFWLGELQRSVHAWEISDQLLQIRQDVESCYFAAQ 65
            |||.||||.|||||||||||||||:||||||.||||||||::||||||||||::||:||||||||
Zfish     1 MEGGKPTLPLVYQAVQALYHDPDPAGKERASVWLGELQRSMYAWEISDQLLQLKQDIESCYFAAQ 65

Human    66 TMKMKIQTSFYELPTDSHASLRDSLLTHIQNLKDLSPVIVTQLALAIADLALQMPSWKGCVQTLV 130
            ||||||||||||||.|||.:||||||:||||||||||:||||||||||||||||.||||||.||:
Zfish    66 TMKMKIQTSFYELPPDSHTALRDSLLSHIQNLKDLSPIIVTQLALAIADLALQMASWKGCVHTLI 130

Human   131 EKYSNDVTSLPFLLEILTVLPEEVHSRSLRIGANRRTEIIEDLAFYSSTVVSLLMTCVEKAGTDE 195
            |||||||:|:.||:||||||||||||||||||||||||||||||:||:|||:||:||.||:|.||
Zfish   131 EKYSNDVSSMTFLIEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSTTVVTLLVTCAEKSGHDE 195

Human   196 KMLMKVFRCLGSWFNLGVLDSNFMANNKLLALLFEVLQQDKTSSNLHEAASDCVCSALYAIENVE 260
            |||:||||||||||||||||:||||||:||.:||:|||:|:||:||||||||||||||||||||.
Zfish   196 KMLIKVFRCLGSWFNLGVLDNNFMANNQLLMILFQVLQRDETSTNLHEAASDCVCSALYAIENVA 260

Human   261 TNLPLAMQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFTELCETFLEKIVCTPGQGLGDLRTLE 325
            .:||||||||||||||||||||||||||||||||||||||||||||||..|.|||||:|||||||
Zfish   261 IHLPLAMQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFTELCETFLEMTVRTPGQGMGDLRTLE 325

Human   326 LLLICAGHPQYEVVEISFNFWYRLGEHLYKTNDEVIHGIFKAYIQRLLHALARHCQLEPDHEGVP 390
            ||||||||||||||||||||||||||||||.||..:|.:|:.|||||||:|||||||:|||||||
Zfish   326 LLLICAGHPQYEVVEISFNFWYRLGEHLYKINDPALHNVFRPYIQRLLHSLARHCQLDPDHEGVP 390

Human   391 EETDDFGEFRMRVSDLVKDLIFLIGSMECFAQLYSTLKEGNPPWEVTEAVLFIMAAIAKSVDPKK 455
            |:|||||||||||||||||:|||:|||||||||||||:|||||||||||||||||:|||:|||  
Zfish   391 EDTDDFGEFRMRVSDLVKDVIFLVGSMECFAQLYSTLREGNPPWEVTEAVLFIMASIAKNVDP-- 453

Human   456 PFSNAVCRHSLLFGQNITSEISNCEYLPPVLRENNPTLVEVLEGVVRLPETVHTAVRYTSIELVG 520
                                            ||||||:||||.:|.||||||.|||||||||||
Zfish   454 --------------------------------ENNPTLMEVLEQIVLLPETVHLAVRYTSIELVG 486

Human   521 EMSEVVDRNPQFLDPVLGYLMKGLCEKPLASAAAKAIHNICSVCRDHMAQHFNGLLEIARSLDSF 585
            |||||:||||..||.||.:|||||.|||||||||||||||||||||||||||.|||:||||||||
Zfish   487 EMSEVIDRNPSMLDTVLNFLMKGLREKPLASAAAKAIHNICSVCRDHMAQHFQGLLDIARSLDSF 551

Human   586 LLSPEAAVGLLKGTALVLARLPLDKITECLSELCSVQVMALKKLLSQEPSNGISSDPTVFLDRLA 650
            .||.:||||||||||||||||||:||.|||::||:||||||||||:|:.|:|.||||||:|||||
Zfish   552 ALSTDAAVGLLKGTALVLARLPLEKIAECLNDLCAVQVMALKKLLAQDSSSGKSSDPTVWLDRLA 616

Human   651 VIFRHTNPIVENGQTHPCQKVIQEIWPVLSETLNKHRADNRIVERCCRCLRFAVRCVGKGSAALL 715
            ||||||||||||||||||||||||||||||||||.|::||||||||||||||||||||||||:||
Zfish   617 VIFRHTNPIVENGQTHPCQKVIQEIWPVLSETLNAHQSDNRIVERCCRCLRFAVRCVGKGSASLL 681

Human   716 QPLVTQMVNVYHVHQHSCFLYLGSILVDEYGMEEGCRQGLLDMLQALCIPTFQLLEQQNGLQNHP 780
            ||||||||:||.::.|||||||||||||||||||||||||||||||||:||||||||.|||:|||
Zfish   682 QPLVTQMVSVYQLYPHSCFLYLGSILVDEYGMEEGCRQGLLDMLQALCMPTFQLLEQPNGLRNHP 746

Human   781 DTVDDLFRLATRFIQRSPVTLLRSQVVIPILQWAIASTTLDHRDANCSVMRFLRDLIHTGVANDH 845
            |||||||||||||:||||||||.|.:::.|:|.|||:|||||||||||||:|:||||||||.|||
Zfish   747 DTVDDLFRLATRFVQRSPVTLLSSSIIVHIIQCAIAATTLDHRDANCSVMKFIRDLIHTGVTNDH 811

Human   846 EEDFELRKELIGQVMNQLGQQLVSQLLHTCCFCLPPYTLPDVAEVLWEIMQVDRPTFCRWLENSL 910
            |:|||:||.||||.|.|.|||||:||::||||||||||||||||||||||..||||||||||.:|
Zfish   812 EDDFEVRKRLIGQAMEQHGQQLVNQLINTCCFCLPPYTLPDVAEVLWEIMVFDRPTFCRWLETTL 876

Human   911 KGLPKETTVGAVTVTHKQLTDFHKQVTSAEECKQVCWALRDFTRLFR 957
            |||||||..|||||||||||||||||||||||||||||:|:||||:|
Zfish   877 KGLPKETAGGAVTVTHKQLTDFHKQVTSAEECKQVCWAIREFTRLYR 923

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TNPO3NP_001369145.1 IBN_N 33..96 CDD:197981 53/62 (85%)
Xpo1 121..249 CDD:462459 105/127 (83%)
tnpo3NP_957381.1 IBN_N 30..96 CDD:197981 55/65 (85%)
Xpo1 120..249 CDD:462459 105/128 (82%)

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