DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TNPO3 and mtr10

DIOPT Version :10

Sequence 1:NP_001369145.1 Gene:TNPO3 / 23534 HGNCID:17103 Length:957 Species:Homo sapiens
Sequence 2:NP_595725.2 Gene:mtr10 / 2539916 PomBaseID:SPBC11G11.07 Length:955 Species:Schizosaccharomyces pombe


Alignment Length:1007 Identity:246/1007 - (24%)
Similarity:439/1007 - (43%) Gaps:123/1007 - (12%)


- Green bases have known domain annotations that are detailed below.


Human     8 LQLVYQAVQALYHDPDPSGKERASFWLGELQRSVHAWEISDQLL-QIRQDVESCYFAAQTMKMKI 71
            ::.:..|:..||.:.|...|.:|:.:|.|.|:|..||:|...:| |....:|:..|||||::.||
pombe     1 METLLSALATLYANTDREQKLQANNYLEEFQKSPAAWQICFSILNQDDSSIEAKLFAAQTLRQKI 65

Human    72 QTSFYELPTDSHASLRDSLLTHIQNLKDLSPVIVTQLALAIADLALQMPSWKGCVQTLVEKYSND 136
            ...|::||.::|...|:|||......||....::..||:.:|.:||.|..|...:..:.:..|:.
pombe    66 VYDFHQLPKETHIEFRNSLLQLFLAAKDSPRPLLVSLAVCMAAIALHMTEWHNVIADVFQACSSK 130

Human   137 VTSLPFLLEILTVLPEEVH-----SRSLRIGANRRTEIIEDLAFYSSTVVSLL---MTCVEKAGT 193
            ..|...:|:.|:|||||..     |.|......|..|::.|   ....|:.||   :..|..:|:
pombe   131 DPSGRCVLQFLSVLPEEASDPRKTSLSWEELCIRVDELLRD---NGPAVLELLVQYVDAVRASGS 192

Human   194 DEKM-LMKVFRCLGSWFNLGVLDSNFMANNKLLALLFEVLQQDKTSSNLHEAASDCVCSALYAIE 257
            .... |..|...|.||.....|| ..|| :.|:.|.|..|..|.    |.|.|.:.:|:.....:
pombe   193 PSSADLGLVLTSLISWLREIPLD-KVMA-SPLIELAFRSLDDDL----LLEDAVEFLCALFNETK 251

Human   258 NVETNLPLAMQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFTELCETFLEKIVCTPGQGLGDLR 322
            :|:......:.|:..:|.|:.  .:..|.:|.:......|:|.|..|.::..|...|...|..:.
pombe   252 DVDETTDAILMLYPRLLELQP--KLIAACDDPETFRALGRLFAEAGEAWVVLIARMPNDFLPLVN 314

Human   323 TLELLLICAGHPQYEVVEISFNFWYRLGEHLYKTNDEVIHGIFKAYIQRLLHALARHCQLEPDHE 387
            .  :..:.|...:.|.::.:|.||:.|.:.:..........:|......|:..:.||... |..|
pombe   315 C--IAQVAANDTELEAIKFTFAFWWDLKQMVELDVYAEARQLFAPIYLELVRIIVRHLHY-PRTE 376

Human   388 GVP---------------EETDDFGEFRMRVSDLVKDLIFLIGSMECFAQLYSTL------KEGN 431
            .:.               :..|.|..||..:.|::||...:.|...|..|:.|.|      ||..
pombe   377 DLAINEQMASNEVLFEDRDAEDRFRSFRHEMGDVLKDCCVVAGVSSCLVQISSQLIKVLKIKESG 441

Human   432 PP--WEVTEAVLFIMAAIAKSVDPKKPFSNAVCRHSLLFGQNITSEISNCEYLPPVLRENNPTLV 494
            .|  |:..||.||.:.||.:.|.                 .|....|.:...:.|.|.|||    
pombe   442 LPYYWQDVEAPLFALRAIGRMVP-----------------ANEDQVIGSLFQILPQLPENN---- 485

Human   495 EVLEGVVRLPETVHTAVRYTSIELVGEMSEVVDRNPQFLDPVLGYLMKG--LCEKPLASAAAKAI 557
                           .|||.:...:|..:|...::.:||:..|.|:..|  :..|.:.||||:|:
pombe   486 ---------------KVRYAATLFLGRYTEWTAQHSEFLELQLNYISAGFEVANKEVQSAAAQAL 535

Human   558 HNICSVCRDHMAQHFNGLLEIARSLDSFLLSPEAAVGLLKGTALVLARLPLDKITECLSELCSVQ 622
            .:.|..||:.:..|.:.|.....:..:: |:|:..:.:.:|.|.::...|:..:.:.:....:..
pombe   536 KHFCYDCREQLVGHLSQLHMFYLNAKTY-LAPDPLMEVAQGLAHIVDIQPVANVYQSVHSFLAPS 599

Human   623 VMALKKLLSQEPSNGISSDPTVFLDRLAVI---FRHTNPIVENGQTHPCQKVIQEIWPVLSETLN 684
            :.::  ||:|...|...::.....|.:.::   ....:|....|:.||..::.|:|||:||.||:
pombe   600 LQSI--LLAQVKLNPTQAELEALADNIDIVTIFLSLVHPPSPAGELHPIVRLFQDIWPILSRTLD 662

Human   685 KHRADNRIVERCCRCLRFAVRCVGKGSAALLQPLVTQ-MVNVYHVHQHSCFLYLGSILVDEYG-- 746
            .. :|..|.||..:.|:..:... |..|.:..|::|: ::..:...|:.|||::....|.::|  
pombe   663 TF-SDVLICERISKLLKNFIYTF-KEKAIVTLPVITEALIKGFEKTQYGCFLWVSGACVRQFGVP 725

Human   747 -MEEGCRQGLLDMLQALCIPTFQLLEQQNGLQNHPDTVDDLFRLATRFIQRSPVTLLRSQVVIPI 810
             |:|.....:...:...|...|..:..:|. :..||.:||.|||....:..:|..:|.||::..:
pombe   726 EMDEQTLSAVWSFVGKQCTNMFYYMSNKNP-KEIPDVIDDFFRLMMDALLANPQMVLESQMLESL 789

Human   811 LQWAIASTTLDHRDANCSVMRFLRDLIHTGVANDHEEDFELRKELIGQVMNQL-------GQQLV 868
            :|.|:.|..|:.::...:|:.||:||:...:   |...:.|.:.|...::..|       .|:|.
pombe   790 IQAAMMSLQLEQQEPLQTVLNFLQDLLAFAL---HTPPYSLIEPLPDSLLKSLADLLLKNSQELY 851

Human   869 SQLLHTCCFCLPPYTLPDVAEVLWEIMQV---DRPTFC-RWLENSLKGLPKETTVGAVTV----T 925
            ..|.:...|..|...:.|.:.||..::::   ..|:.| :::.|.|..||      |:|:    .
pombe   852 IILFNGMVFTFPRDNISDASAVLIPLIRLVFAADPSLCIKYMSNVLDQLP------AMTIGQEER 910

Human   926 HKQLTDFHKQVTSAEECKQVCWALRDFTRLFR 957
            .|.|.:|.|..||: |..::...|:|:|.::|
pombe   911 EKFLANFSKHCTSS-EMPRLRAHLQDWTAMYR 941

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TNPO3NP_001369145.1 IBN_N 33..96 CDD:197981 25/63 (40%)
Xpo1 121..249 CDD:462459 37/136 (27%)
mtr10NP_595725.2 IBN_N 23..89 CDD:197981 26/65 (40%)
Xpo1 95..243 CDD:462459 43/156 (28%)

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