DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TNPO3 and tnpo3

DIOPT Version :10

Sequence 1:NP_001369145.1 Gene:TNPO3 / 23534 HGNCID:17103 Length:957 Species:Homo sapiens
Sequence 2:XP_031754955.1 Gene:tnpo3 / 100490799 XenbaseID:XB-GENE-998615 Length:933 Species:Xenopus tropicalis


Alignment Length:968 Identity:813/968 - (83%)
Similarity:874/968 - (90%) Gaps:46/968 - (4%)


- Green bases have known domain annotations that are detailed below.


Human     1 MEGAKPTLQLVYQAVQALYHDPDPSGKERASFWLGELQRSVHAWEISDQLLQIRQDVESCYFAAQ 65
            ||| ||.||.|||||||||||||||||||||.|||||||||:||||:||||||.|||||||||||
 Frog     1 MEG-KPGLQTVYQAVQALYHDPDPSGKERASLWLGELQRSVYAWEIADQLLQIHQDVESCYFAAQ 64

Human    66 TMKMKIQTSFYELPTDSHASLRDSLLTHIQNLKDLSPVIVTQLALAIADLALQMPSWKGCVQTLV 130
            |||:||||||||||:|||.|||||||:|||||||:||||:||||||||||||.|.||||||||||
 Frog    65 TMKVKIQTSFYELPSDSHVSLRDSLLSHIQNLKDMSPVILTQLALAIADLALLMASWKGCVQTLV 129

Human   131 EKYSNDVTSLPFLLEILTVLPEEVHSRSLRIGANRRTEIIEDLAFYSSTVVSLLMTCVEKAGTDE 195
            |.||||||||||||||||||||||||||||||||||.|||||||:|||||||||::|.||||.:|
 Frog   130 ESYSNDVTSLPFLLEILTVLPEEVHSRSLRIGANRRAEIIEDLAYYSSTVVSLLLSCAEKAGDNE 194

Human   196 KMLMKVFRCLGSWFNLGVLDSNFMANNKLLALLFEVLQQDKTSSNLHEAASDCVCSALYAIENVE 260
            |||:|:|:|||||||||||||||||||:||.|||:|||||:|.:|||||||||||||||||||||
 Frog   195 KMLIKIFKCLGSWFNLGVLDSNFMANNRLLLLLFQVLQQDRTPTNLHEAASDCVCSALYAIENVE 259

Human   261 TNLPLAMQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFTELCETFLEKIVCTPGQGLGDLRTLE 325
            :|||||.|||||||||||||||||||||:||||||||||||||||||||||.||.:.||||||||
 Frog   260 SNLPLATQLFQGVLTLETAYHMAVAREDIDKVLNYCRIFTELCETFLEKIVTTPCRDLGDLRTLE 324

Human   326 LLLICAGHPQYEVVEISFNFWYRLGEHLYKTNDEVIHGIFKAYIQRLLHALARHCQLEPDHEGVP 390
            ||||||||||||||||||||||||||||||..|.|||||||.:||||||||||||||||||||||
 Frog   325 LLLICAGHPQYEVVEISFNFWYRLGEHLYKMTDAVIHGIFKPFIQRLLHALARHCQLEPDHEGVP 389

Human   391 EETDDFGEFRMRVSDLVKDLIFLIGSMECFAQLYSTLKEGNPPWEVTEAVLFIMAAIAKSVDPKK 455
            ||||||||||:||||||||||:|:||||||:|||||||:|||||||||||||||||||||:||  
 Frog   390 EETDDFGEFRLRVSDLVKDLIYLVGSMECFSQLYSTLKDGNPPWEVTEAVLFIMAAIAKSIDP-- 452

Human   456 PFSNAVCRHSLLFGQNITSEISNCEYLPPVLRENNPTLVEVLEGVVRLPETVHTAVRYTSIELVG 520
                                            ||||||||||||||||||:||.|||||||||||
 Frog   453 --------------------------------ENNPTLVEVLEGVVRLPESVHIAVRYTSIELVG 485

Human   521 EMSEVVDRNPQFLDPVLGYLMKGLCEKPLASAAAKAIHNICSVCRDHMAQHFNGLLEIARSLDSF 585
            |||||||||||||||||.||||||.:..|||.:||||.|||||||||||.|||||||||||||||
 Frog   486 EMSEVVDRNPQFLDPVLAYLMKGLFQPSLASPSAKAIQNICSVCRDHMALHFNGLLEIARSLDSF 550

Human   586 LLSPEAAVGLLKGTALVLARLPLDKITECLSELCSVQVMALKKLLSQEPSNGISSDPTVFLDRLA 650
            .|.|:||||||||||||||||||:||:|||||||||||.:||:||||:|:||:|||||:||||||
 Frog   551 TLHPDAAVGLLKGTALVLARLPLEKISECLSELCSVQVNSLKRLLSQDPNNGLSSDPTLFLDRLA 615

Human   651 VI-----------FRHTNPIVENGQTHPCQKVIQEIWPVLSETLNKHRADNRIVERCCRCLRFAV 704
            ||           ||||||||||||||||||||||||||||||:|||||||||||||||||||||
 Frog   616 VIFRTFSQKDIGLFRHTNPIVENGQTHPCQKVIQEIWPVLSETMNKHRADNRIVERCCRCLRFAV 680

Human   705 RCVGKGSAALLQPLVTQMVNVYHVHQHSCFLYLGSILVDEYGMEEGCRQGLLDMLQALCIPTFQL 769
            |||||||||||||||||||.|||:|||||||||||||||||||||||:|||||||||||:|||||
 Frog   681 RCVGKGSAALLQPLVTQMVEVYHIHQHSCFLYLGSILVDEYGMEEGCQQGLLDMLQALCVPTFQL 745

Human   770 LEQQNGLQNHPDTVDDLFRLATRFIQRSPVTLLRSQVVIPILQWAIASTTLDHRDANCSVMRFLR 834
            |||||||:||||||||||||.|||:||.|:.||||||||.:|:||||::||||||||||||:|||
 Frog   746 LEQQNGLRNHPDTVDDLFRLFTRFVQRCPIVLLRSQVVIHVLRWAIAASTLDHRDANCSVMKFLR 810

Human   835 DLIHTGVANDHEEDFELRKELIGQVMNQLGQQLVSQLLHTCCFCLPPYTLPDVAEVLWEIMQVDR 899
            |||||||:|||||:||:||:||.||:.|:||||||||:|.|||||||||||||||||||.|..:|
 Frog   811 DLIHTGVSNDHEENFEIRKDLIQQVLTQVGQQLVSQLIHACCFCLPPYTLPDVAEVLWEAMVFNR 875

Human   900 PTFCRWLENSLKGLPKETTVGAVTVTHKQLTDFHKQVTSAEECKQVCWALRDFTRLFR 957
            ||||||||.|||.|||:..|||.|||||||||||||||||||||||||||||||||||
 Frog   876 PTFCRWLEASLKNLPKDMAVGAATVTHKQLTDFHKQVTSAEECKQVCWALRDFTRLFR 933

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TNPO3NP_001369145.1 IBN_N 33..96 CDD:197981 55/62 (89%)
Xpo1 121..249 CDD:462459 110/127 (87%)
tnpo3XP_031754955.1 IBN_N 29..95 CDD:197981 57/65 (88%)
Xpo1 120..221 CDD:462459 89/100 (89%)

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