DRSC/TRiP Functional Genomics Resources

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Protein Alignment NUP188 and Nup188

DIOPT Version :10

Sequence 1:NP_056169.1 Gene:NUP188 / 23511 HGNCID:17859 Length:1749 Species:Homo sapiens
Sequence 2:NP_001246283.1 Gene:Nup188 / 36397 FlyBaseID:FBgn0033766 Length:1866 Species:Drosophila melanogaster


Alignment Length:333 Identity:70/333 - (21%)
Similarity:117/333 - (35%) Gaps:98/333 - (29%)


- Green bases have known domain annotations that are detailed below.


Human   443 GAISTPVKHVDDHPPKAVEEVTVEKNEKQTPTLPEPKPVYAQVGQPDVDLPVSPSDGAL--PNSA 505
            ||.:....|:.|:|     .||:|.|              |.....:||..:.||...:  |::.
  Fly   111 GAANIRQIHLADNP-----TVTIETN--------------AFSSLSNVDRLILPSGIRVIEPDAF 156

Human   506 H---EDGILR------PSMKLVKFRKGDSVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGDQIL 561
            :   ..|.|:      .|::...||....:.|.....:|:||..||       |.|||.:.:.:.
  Fly   157 YGLETVGYLKLSFMDLTSLEPYTFRGLTHIKLLSLQESDLGIIRAG-------AFEGLVQVELLN 214

Human   562 RVN---------NVDFTNIIREEAVL-----FLLDLPKGEEVTILAQKKKDV----------YRR 602
            .:|         |:...|.||   ||     .||:.|:...:.:.......|          ...
  Fly   215 ILNNKIDAIQELNITAANRIR---VLRIQGNHLLETPESGSIVLEGIDTLHVNSNYFPCGCHIHT 276

Human   603 IVESDVGDSFYIRTHFEYEKESPYGLSFNKGEVFRVVDTLYNGKLGSWLAI-RIGKNHKEVERGI 666
            :::|.:.:..|: :|    ..:|.|...:|......::.  ||...|.:.| .||:..::|.|  
  Fly   277 LLDSPLSNGTYV-SH----SGAPAGDFLSKNYCISPLEV--NGMPMSSIDIYSIGRCLEQVTR-- 332

Human   667 IPNKNRAEQLASVQYTLPKTAGGDRADFWRFRGLRSSKRNLRKSRED------------LSAQP- 718
             .|...|..:.|...         |...|. |.|:....:.::|.|.            |:|.| 
  Fly   333 -ENLEAANSVISTML---------RGQSWN-RWLQWRSEHSKRSHETTLISTVSSAVRFLAASPI 386

Human   719 VQTKFPAY 726
            :..||..|
  Fly   387 IAIKFVVY 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NUP188NP_056169.1 Nup188 31..941 CDD:463110 70/333 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1514..1542
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1707..1733
Nup188NP_001246283.1 Nup192 31..943 CDD:475157 70/333 (21%)
Blue background indicates that the domain is not in the aligned region.

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