DRSC/TRiP Functional Genomics Resources

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Protein Alignment CBX5 and Pc

DIOPT Version :10

Sequence 1:NP_036249.1 Gene:CBX5 / 23468 HGNCID:1555 Length:191 Species:Homo sapiens
Sequence 2:NP_524199.1 Gene:Pc / 40358 FlyBaseID:FBgn0003042 Length:390 Species:Drosophila melanogaster


Alignment Length:128 Identity:40/128 - (31%)
Similarity:68/128 - (53%) Gaps:22/128 - (17%)


- Green bases have known domain annotations that are detailed below.


Human     2 GKKTKRTADSSSSEDEE-EYVVEKVLDRRVVKGQVEYLLKWKGFSEEHNTWEPEKNLDCPELISE 65
            |.|.|...|:::.:..: .|..||::.:||.||.|||.:||||:::.:||||||.|:....||..
  Fly     7 GSKGKLGRDNATDDPVDLVYAAEKIIQKRVKKGVVEYRVKWKGWNQRYNTWEPEVNILDRRLIDI 71

Human    66 FMKKYK----------KMKEGENNKPREKSESNK----------RKSNFSNSADDIKSKKKRE 108
            :.:..|          |.||.|.: |..:||.::          .::..|::..|.:|||:::
  Fly    72 YEQTNKSSGTPSKRGIKKKEKEPD-PEPESEEDEYTFTENDVDTHQATTSSATHDKESKKEKK 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CBX5NP_036249.1 CD_HP1alpha_Cbx5 19..68 CDD:349298 23/48 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 70..117 13/59 (22%)
CSD_HP1alpha_Cbx5 116..173 CDD:349302
PcNP_524199.1 CD_polycomb 23..76 CDD:349291 23/52 (44%)
CBX7_C 341..373 CDD:465385
Blue background indicates that the domain is not in the aligned region.

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