DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GCAT and gcat

DIOPT Version :10

Sequence 1:XP_016884163.1 Gene:GCAT / 23464 HGNCID:4188 Length:521 Species:Homo sapiens
Sequence 2:NP_989284.1 Gene:gcat / 394899 XenbaseID:XB-GENE-984769 Length:415 Species:Xenopus tropicalis


Alignment Length:520 Identity:329/520 - (63%)
Similarity:371/520 - (71%) Gaps:106/520 - (20%)


- Green bases have known domain annotations that are detailed below.


Human     1 MWPGNAWRAALFWVPRGRRAQSALAQLRGILEGELEGIRGAGTWKSERVITSRQGPHIRVDGVSG 65
            ||.....|:.|    :..|..||:|||||:||.|||.|||||||||||:|||:|||||:|:|.. 
 Frog     1 MWARCLARSPL----KPGRGLSAVAQLRGVLEKELEAIRGAGTWKSERIITSKQGPHIKVEGKD- 60

Human    66 GPGTVIFPGLPLPHLSCCIHLLSFTSGILNFCANNYLGLSSHPEVIQAGLQALEEFGAGLSSVRF 130
                                     :|||||||||||||||||:||:|..:.|||||||||||||
 Frog    61 -------------------------TGILNFCANNYLGLSSHPQVIRAACETLEEFGAGLSSVRF 100

Human   131 ICGTQSIHKNLEAKIARFHQREDAILYPSCYDANAGLFESRALVQPGTETRGPQREAQNTLPLYP 195
            |||||:|||:||.||||||||||||||.||:|||||:||                          
 Frog   101 ICGTQNIHKSLEQKIARFHQREDAILYISCFDANAGIFE-------------------------- 139

Human   196 EERPGWQYSFLICWSPGQGRSPGWLNDGSTLTASLQALLTPEDAVLSDELNHASIIDGIRLCKAH 260
                                                |||:||||||||||||||||||||||||:
 Frog   140 ------------------------------------ALLSPEDAVLSDELNHASIIDGIRLCKAN 168

Human   261 KYRYRHLDMADLEAKLQEAQKHRLRLVATDGAFSMDGDIAPLQEICCLASRYGALVFMDECHATG 325
            ||||:|:|:.||||||:|||||||||:||||.||||||||||:|||.||.||.||||:|||||||
 Frog   169 KYRYKHMDLDDLEAKLKEAQKHRLRLIATDGVFSMDGDIAPLREICSLAKRYNALVFIDECHATG 233

Human   326 FLGPTGRGTDELLGVMDQVTIINSTLGKALGGASGGYTTGPGPLVSLLRQRARPYLFSNSLPPAV 390
            |:||.||||||||||||||||:|||||||||||:|||||||.||:.|||||:|||||||:|||||
 Frog   234 FMGPNGRGTDELLGVMDQVTIVNSTLGKALGGAAGGYTTGPKPLIDLLRQRSRPYLFSNTLPPAV 298

Human   391 VGCASKALDLLMGSNTIVQSMAAKTQRCDSQQGRLGGGETWFRSKMEAAGFTISGASHPICPVML 455
            ||.|||||||||.||.|.||:||||:|              ||:||..|||||||..||||||||
 Frog   299 VGSASKALDLLMESNEIAQSVAAKTKR--------------FRTKMTEAGFTISGKDHPICPVML 349

Human   456 GDARLASRMADDMLKRGIFVIGFSYPVVPKGKARIRVQISAVHSEEDIDRCVEAFVEVGRLHGAL 520
            |||||||.||||:|:|||:|||||:|||||||||||||||..||::|||.||:.|.||||.||.:
 Frog   350 GDARLASLMADDLLQRGIYVIGFSFPVVPKGKARIRVQISTAHSDDDIDNCVQMFTEVGRKHGVI 414

Human   521  520
             Frog   415  414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GCATXP_016884163.1 AAT_I 27..520 CDD:450240 320/492 (65%)
gcatNP_989284.1 AAT_I 23..414 CDD:450240 320/492 (65%)

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