DRSC/TRiP Functional Genomics Resources

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Protein Alignment ABCA5 and CG11147

DIOPT Version :10

Sequence 1:NP_061142.2 Gene:ABCA5 / 23461 HGNCID:35 Length:1642 Species:Homo sapiens
Sequence 2:NP_608954.1 Gene:CG11147 / 33803 FlyBaseID:FBgn0031734 Length:711 Species:Drosophila melanogaster


Alignment Length:239 Identity:71/239 - (29%)
Similarity:126/239 - (52%) Gaps:13/239 - (5%)


- Green bases have known domain annotations that are detailed below.


Human  1289 SIMVSNLHKEYDDKKDFLLSRKVKKVATKYISFCVKKGEILGLLGPNGAGKSTIINILVGDIEPT 1353
            ::.|.|.:|.|..|.:       .|:....::..|.:|.|.||||.:|.||:|:::.:||.....
  Fly     3 AVEVRNGYKYYGSKSN-------PKIVLNQLNMNVMRGSIYGLLGASGCGKTTLLSCIVGQRRLN 60

Human  1354 SGQ-VFLGDYSSETSEDDDSLKCMGYCPQINPLWPDTTLQEHFEIYGAVKGMSASDMKEVISRIT 1417
            .|: |.||....|........: :|:.||...|..:.|::|....:|.:.|::...::|....:.
  Fly    61 GGEVVVLGAKPGEPGSGVPGSR-VGFMPQEIALVEEMTVKETIFYFGRIYGLTDERIREKFKLLK 124

Human  1418 HALDLKEHLQKTVKKLPAGIKRKLCFALSMLGNPQITLLDEPSTGMDPKAKQHMWRAIRTAFKNR 1482
            ..|.|.. .::.:|:...|.:|:|.||.:|:.:|::.:||||:.|:||..::.:|..:....:|.
  Fly   125 ELLQLPP-ARQMIKQCSGGQQRRLSFACAMIHDPELLILDEPTVGLDPMLREKIWDFLVETTRNS 188

Human  1483 KRAAILTTHYMEEA-EAVCDRVAIMVSGQLRCIGTVQHLKSKFG 1525
            |.|.|:||||:||| :|.|  :.:|.:|.|....|..::..|||
  Fly   189 KLAVIITTHYIEEAKQANC--IGLMRNGVLLAEDTPTNIMIKFG 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ABCA5NP_061142.2 rim_protein <84..1618 CDD:130324 71/239 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1249..1268
CG11147NP_608954.1 CcmA 4..245 CDD:440746 71/238 (30%)
ABC2_membrane_3 322..702 CDD:463674
YadH 513..710 CDD:440604
Blue background indicates that the domain is not in the aligned region.

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