DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATP1B4 and GABA-B-R1

DIOPT Version :9

Sequence 1:NP_001135919.1 Gene:ATP1B4 / 23439 HGNCID:808 Length:357 Species:Homo sapiens
Sequence 2:NP_001246033.1 Gene:GABA-B-R1 / 34878 FlyBaseID:FBgn0260446 Length:841 Species:Drosophila melanogaster


Alignment Length:44 Identity:14/44 - (31%)
Similarity:20/44 - (45%) Gaps:3/44 - (6%)


- Green bases have known domain annotations that are detailed below.


Human    25 DEANQNYLADEEEEAEEEARVTVVPKSEEEEEEEEKEEEEEEEK 68
            |:|...|..|.....|:|.|   ..|...|.||.::...::|||
  Fly   738 DKAESKYNPDSAISKEDEER---YQKLVTENEELQRLITQKEEK 778

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATP1B4NP_001135919.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 15..80 14/44 (32%)
Na_K-ATPase 82..351 CDD:306737
GABA-B-R1NP_001246033.1 PBP1_GABAb_receptor 34..437 CDD:107361
ANF_receptor 52..415 CDD:279440
7tm_3 476..730 CDD:278433
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3927
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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