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Protein Alignment TARDBP and tif307
DIOPT Version :10
| Sequence 1: | NP_031401.1 |
Gene: | TARDBP / 23435 |
HGNCID: | 11571 |
Length: | 414 |
Species: | Homo sapiens |
| Sequence 2: | NP_595727.1 |
Gene: | tif307 / 2540819 |
PomBaseID: | SPBC18H10.03 |
Length: | 282 |
Species: | Schizosaccharomyces pombe |
| Alignment Length: | 89 |
Identity: | 28/89 - (31%) |
| Similarity: | 44/89 - (49%) |
Gaps: | 10/89 - (11%) |
- Green bases have known domain annotations that are detailed below.
|
Human 97 KRAVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKV 161
||....::.|.|..|...|.|::|::.|..||.:..|.:.||.:||.:|||.||.:.:.:..:|.
pombe 195 KRERDDSATLRVTNLSDDTREEELRDLFRRFGGIQRVYLAKDKETGRAKGFAFVSYYDRDCAIKA 259
Human 162 MSQRHMIDG-RW------CDCKLP 178
|..:|| .| |:...|
pombe 260 ---RDRLDGYGWNNLILRCEFSKP 280
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| TARDBP | NP_031401.1 |
TDP43_N |
4..77 |
CDD:465833 |
|
Software error:
Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.
For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message
and the time and date of the error.