DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GRIP1 and bbg

DIOPT Version :9

Sequence 1:XP_016874587.1 Gene:GRIP1 / 23426 HGNCID:18708 Length:1188 Species:Homo sapiens
Sequence 2:NP_001246755.1 Gene:bbg / 39583 FlyBaseID:FBgn0087007 Length:2637 Species:Drosophila melanogaster


Alignment Length:976 Identity:186/976 - (19%)
Similarity:315/976 - (32%) Gaps:349/976 - (35%)


- Green bases have known domain annotations that are detailed below.


Human    52 FSASEALDAYIDDFHLNYEPP--------DIDTKVNLDQSPLEFLAKSNSDESPYTKSASQTKPP 108
            ||::..|||.         ||        ...|:..|::|....|...:|..:|..|:.:.:  .
  Fly  1760 FSSNNELDAI---------PPAPATAPISSSFTRKPLNRSSENLLDSCSSSSAPSLKTRAMS--V 1813

Human   109 DGALAVRRQ-----SIPEEFKGSTVVELMKKEGT---------TLGLTVSGGIDKDGKPRVSNLR 159
            :....|:||     .:|:.....::..|.....|         :.|.:.|.|:::    |:|...
  Fly  1814 ENLNDVQRQYQLAKQLPQLHVADSMYSLNTATPTPSYASLPRRSHGGSYSSGVER----RISFSG 1874

Human   160 QGGIAARSDQLDVGDYIKAVNGI------NLAKFRHDEIISLLKNVGER-VVLEVEYELPPVSVQ 217
            :||.||...        .|:..|      :|:|.|     .|:  :.|| .:||...:||.:..|
  Fly  1875 EGGDAANRK--------AAITNILEQRRRSLSKLR-----GLV--IPERPQLLEPILDLPEIKSQ 1924

Human   218 -----------------GSSVIFRTVEVTLHKEGNTFGFVIRGGAHDDRNKSRPV---------- 255
                             ..|.:.|..::......|.:..::      :.|:.||:          
  Fly  1925 VKAASGEDSTDSGLGESHRSTVNRNCQLGAGGAANNYRSIL------NTNQRRPLEQQLSQPPAK 1983

Human   256 ----VITCVRPGG--------PADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQEA-AL 307
                .:|.::|..        |.|:|....      ||........|..|..::.:....|. ..
  Fly  1984 PPRTSLTPLQPRSMMIPPPPPPLDQESDTD------SVFSHTARVATPPEKFALTRTLSSETNTS 2042

Human   308 LIEYDVSVMDSVATA-SGPLLVEVAKTPGASLGVALTTSMCCNKQVIVIDKIKSASIADRCGALH 371
            :...:.|.:.|.::| |......:..||...|...:..|...|.:.:.:...||...:.:|.:..
  Fly  2043 IASSNTSTLTSGSSAGSQASCSSLGSTPAVDLTRRVLKSQVINGEAVALSSRKSILASAKCRSAK 2107

Human   372 VGDHILSIDGTSMEYCTLAEA--------------------------------TQFLANTTD--- 401
            ........|.|..|.|:||..                                .:..::|.|   
  Fly  2108 SRGQEEDNDSTDGEACSLANRRMKPISSYKLQQQQIQLGKQLVVDKLINVAAYVELTSDTDDSSR 2172

Human   402 ----------------------------------QVKLEILP-----------HHQTRLALKGPD 421
                                              |||..:||           ..||...|:   
  Fly  2173 RSDTPAKISAMFIDEERKASFKGDPNQQAKVKVEQVKPMVLPMLLPSAKREPLKQQTTAELR--- 2234

Human   422 HVKIQRSDRQLTWDSWASNHSSLHTNHHYNTYHPDHCRVPALTFPKAPPPNSPPALVSSSFSPTS 486
                ::.:|.....:...|||.:   .|..|..|.|.|..:|           .:|.|||     
  Fly  2235 ----EKFERSAAAQAQTQNHSPV---IHKVTQKPHHERFSSL-----------DSLASSS----- 2276

Human   487 MSAYSLSSLNMGTLPRSLYSTSPRGTMMRRRLKKKDFKSSLSLASSTVGLAGQVVHTETTE---- 547
             |..|.::.|:.|       |....|         :|.|..||.|:...:..|.|.....|    
  Fly  2277 -SGVSSTTQNVST-------TQETAT---------EFGSFSSLGSNQSLITAQDVQQIVEEADPP 2324

Human   548 ---------VVLTADPVTGFGIQLQ-GSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAI 602
                     |:...:|.:..||.|. ||.:..:.::    |..|.:::||.:.|.|:.|||::|:
  Fly  2325 LKTPEAFIIVLQRENPESSIGITLAGGSDYEAKEIT----IHKILSNTPAAKDGRLKKGDRILAV 2385

Human   603 NGIPTEDSTFEEASQLLRD------------------------------SSITSKVT-------- 629
            ||:.....|..|:..:|:.                              ||:..|.|        
  Fly  2386 NGMSMRGLTHRESISVLKTPRPEVVLVVTRSESLVVKALTKKRSSLGSLSSLNEKPTELDYERKR 2450

Human   630 --------LEIEFDV-----AESVI---PSSGTFHVKLPKK-HNVELGITISSPSSRKPGDPLVI 677
                    |:::.|:     .||.:   ||:|:.....|.. |:.:...||:...:|:       
  Fly  2451 NYHKASRSLDLDLDLVSNEAGESPVATTPSTGSVSPPQPASLHDEDAEATIAGIRARR------- 2508

Human   678 SDIKKGSVAHRTGTLELGDKLLAIDNIRLDNCSMEDAVQILQQCEDLVKLKIRKDEDNSDEQESS 742
             .:.:|..| :..|.||.::.....|        ..|.:|..|.||..               :|
  Fly  2509 -QLSRGDAA-KLSTSELLERAAEARN--------AIAAEIRAQAEDAA---------------AS 2548

Human   743 GAIIYTVELKRYGGPLGITISGTEEPFD------PIIISSLTKGGLAERTGAIHIGDRILAINSS 801
            |.....||:.:....||.:|.|   .||      |:|:..:..||.|::|..:..||.||:||.:
  Fly  2549 GGGARCVEIVKDSCGLGFSIEG---GFDSPLGNRPLIVKKVFMGGAAQKTNQVRNGDEILSINGA 2610

Human   802 S 802
            |
  Fly  2611 S 2611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GRIP1XP_016874587.1 PDZ_signaling 128..208 CDD:238492 21/95 (22%)
PDZ_signaling 227..310 CDD:238492 14/105 (13%)
PDZ_signaling 325..408 CDD:238492 19/151 (13%)
PDZ_signaling 545..633 CDD:238492 28/147 (19%)
PDZ_signaling 646..730 CDD:238492 16/84 (19%)
PDZ_signaling 746..827 CDD:238492 21/63 (33%)
PDZ_signaling 1062..1142 CDD:238492
bbgNP_001246755.1 PDZ_signaling 90..177 CDD:238492
ATP-synt_B <1084..>1109 CDD:304375
PDZ_signaling 2331..2413 CDD:238492 22/85 (26%)
PDZ_signaling 2553..2634 CDD:238492 21/62 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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