DRSC/TRiP Functional Genomics Resources

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Protein Alignment CTDNEP1 and ttm50

DIOPT Version :10

Sequence 1:NP_056158.2 Gene:CTDNEP1 / 23399 HGNCID:19085 Length:244 Species:Homo sapiens
Sequence 2:NP_570027.1 Gene:ttm50 / 31266 FlyBaseID:FBgn0250874 Length:428 Species:Drosophila melanogaster


Alignment Length:271 Identity:71/271 - (26%)
Similarity:110/271 - (40%) Gaps:70/271 - (25%)


- Green bases have known domain annotations that are detailed below.


Human     8 LGLRTF--VAFAAKLWSFFIY------------------------LLRRQIRTVIQYQTV----- 41
            ||...|  .|.||..|:.:.:                        .|:|..:::..||.:     
  Fly   147 LGFAIFGGSAVAAGFWAVYEFGKPEVDPNGQPIEDEFTHKPLVQQYLQRMWKSIHYYQRMIQEPS 211

Human    42 RYDIL--PLSPVSRNRLAQVK-RKILVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHP 103
            |..:|  ||.|      ..|: |..|||::.:.|:|                ||:..:.     .
  Fly   212 RAKLLPDPLKP------PYVQPRYTLVLEMKDVLVH----------------PDWTYQT-----G 249

Human   104 VRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQHCTLELGSY 168
            .||  .|||.||.||...::.:|:|||||...:....:.|.||.:..|: .|..|.......|.:
  Fly   250 WRF--KKRPGVDHFLAECAKDFEIVVFTAEQGMTVFPILDALDPNGYIM-YRLVRDATHFVDGHH 311

Human   169 IKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPSDTALLNLLPMLD--ALRFTADVR 231
            :|:|..::.||..::::|....|.:.||||...:..|..:..|..||:|:..|.  |.....|||
  Fly   312 VKNLDNLNRDLKKVIVVDWDANATKMHPDNTFGLARWHGNDDDGQLLDLIAFLKIIAQNNVDDVR 376

Human   232 SVLSRNLHQHR 242
            .|    ||.:|
  Fly   377 EV----LHYYR 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CTDNEP1NP_056158.2 HIF-SF_euk 61..229 CDD:274055 47/169 (28%)
ttm50NP_570027.1 CPDc 227..355 CDD:214729 41/151 (27%)

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