DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fus and caz

DIOPT Version :9

Sequence 1:NP_631888.1 Gene:Fus / 233908 MGIID:1353633 Length:518 Species:Mus musculus
Sequence 2:NP_523365.2 Gene:caz / 32587 FlyBaseID:FBgn0285954 Length:399 Species:Drosophila melanogaster


Alignment Length:450 Identity:190/450 - (42%)
Similarity:229/450 - (50%) Gaps:110/450 - (24%)


- Green bases have known domain annotations that are detailed below.


Mouse   127 QSGGYGQQSGYG--------GQQQSYGQQQSSYN-PPQGYGQQ-NQYNSSSGGGGGGGGGNYGQD 181
            :.||||..||.|        ...|....:..:|| ||..||:| ..|:|.||..|.||.||    
  Fly     2 ERGGYGGGSGQGYNNFAVPPPNYQQMPNKTGNYNEPPPNYGKQGGGYDSGSGHRGSGGSGN---- 62

Mouse   182 QSSMSGGGGGGGYGNQDQSGGGGGGYGGGQQDRGGRGRGGGG----GYNRSSGGYEPRGRGGGRG 242
                 ||||||.:                 .||||...|.||    .||:..|||...|.|||.|
  Fly    63 -----GGGGGGSW-----------------NDRGGNSYGNGGASKDSYNKGHGGYSGGGGGGGGG 105

Mouse   243 GRGGMGGSDRGGFNKFGGPRDQGSRHDSEQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKTN 307
            |.||.||:|.                     .:..:||||.|:..:.|.:.:..:|..|||||.:
  Fly   106 GGGGSGGNDM---------------------ITQEDTIFVSGMDPSTTEQDIETHFGAIGIIKKD 149

Mouse   308 KKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNRGG 372
            |:|.:|.|.||.::|||..||||||::||..:|::||:||||::|:||.||||.|.|:.::|:||
  Fly   150 KRTMKPKIWLYKNKETGASKGEATVTYDDTNAAQSAIEWFDGRDFNGNAIKVSLAQRQNNWNKGG 214

Mouse   373 GNGRGGRGRGGPMG-RGGYGGGGSGGGGRGGFPSGGGGGGG-----------------QQRAGDW 419
            |.|.||.||||..| |||.||||.||||.|.|..|||||||                 |.|.|||
  Fly   215 GGGGGGGGRGGFGGRRGGGGGGGGGGGGGGRFDRGGGGGGGRYDRGGGGGGGGGGGNVQPRDGDW 279

Mouse   420 KCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDDRRGRGGYDRGGYRGRGG--- 481
            ||  .:|.|.||:||||||:||.||.|..|...||.  ||.||.. .|.||||||..||.||   
  Fly   280 KC--NSCNNTNFAWRNECNRCKTPKGDDEGSSGGGG--GGGYGGG-GGGGGYDRGNDRGSGGGGY 339

Mouse   482 ---DRGG-FRGGRGGG----------DRGGFGPGKMDSRGEHRQD---------RRERPY 518
               |||| .:||.|||          |..|.|.|.....|.:|:|         .|.|||
  Fly   340 HNRDRGGNSQGGGGGGGGGGGYSRFNDNNGGGRGGRGGGGGNRRDGGPMRNDGGMRSRPY 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FusNP_631888.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..279 53/165 (32%)
RRM <257..>367 CDD:223796 45/109 (41%)
RRM_FUS_TAF15 276..361 CDD:240979 42/84 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 368..417 34/66 (52%)
zf-RanBP 415..442 CDD:279035 17/26 (65%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 437..518 43/106 (41%)
cazNP_523365.2 RRM <118..>205 CDD:223796 43/86 (50%)
RRM_SARFH 122..204 CDD:240978 42/81 (52%)
zf-RanBP 275..304 CDD:279035 20/30 (67%)
RanBP2-type Zn finger 279..298 CDD:275375 13/20 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843277
Domainoid 1 1.000 87 1.000 Domainoid score I7978
eggNOG 1 0.900 - - E1_KOG1995
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 298 1.000 Inparanoid score I2696
Isobase 1 0.950 - 0 Normalized mean entropy S1093
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002238
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23238
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4499
SonicParanoid 1 1.000 - - X712
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.830

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