Sequence 1: | NP_056142.2 | Gene: | SMG5 / 23381 | HGNCID: | 24644 | Length: | 1016 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001285914.1 | Gene: | Smg5 / 34804 | FlyBaseID: | FBgn0019890 | Length: | 1177 | Species: | Drosophila melanogaster |
Alignment Length: | 1246 | Identity: | 283/1246 - (22%) |
---|---|---|---|
Similarity: | 460/1246 - (36%) | Gaps: | 368/1246 - (29%) |
- Green bases have known domain annotations that are detailed below.
Human 21 KRLYRAVVEAVHRLDLILCNKTAYQEVFKPENISLRNKLRELCVKLMFLHPVDYGRKAEELLWRK 85
Human 86 VYYEVIQLIKTN-KKHIHSRSTLE---CAYRTHLVAGIGFYQHLLLYIQSHYQLELQCCIDWTHV 146
Human 147 TD----PLIGCKKPVSASG--------KEMDWAQMACHRCLVYLGDLSRYQNELAGVDTEL---- 195
Human 196 -LAERFYYQALSVAPQIGMPFNQLGTLAGSKYYNVEAMYCYLRCIQSEVSFEGAYGNLKRLYDKA 259
Human 260 AKMYHQLKKCETRKLSPGKKRCKDIKRLLVNFMYLQSLLQPKSSSVDSEL---TSLCQSVLEDFN 321
Human 322 --LCLFYLPSSPNLSLASEDEEEYESGYAFLPDLLIFQMVIICLMCVHSLERAGSKQYSAAIAFT 384
Human 385 LALFSHLVN--------------HVNIRLQAELEE-----------------------GE----- 407
Human 408 -------NPVPAFQSDGTDEPESKEPVEKEEEPDPEPPPVTPQVGEGRKSRKFSR---------L 456
Human 457 SC--------LRRRRHPPKVGDDS---------------------DLSEGFESDSSHDSARASEG 492
Human 493 SDSGSDKSLE--------------GGGTAFDAETDSE-----------MNSQESRSDLEDMEEEE 532
Human 533 GTRSPTLEPPRGRSEAPDSLNGPLGPSEASIASNLQAMSTQMFQTKRCFRLAPTFSNLLLQPTTN 597
Human 598 PHTSASHRPCVNGDVDKPSEPASEEGSESEGSESSGRSCRNERSIQEKLQVLMAEGLLPAVKVFL 662
Human 663 DWLRTNPDLIIVCAQSSQSLWNRLSVLLNL----LPAAGELQESGLALCPEVQDLLEGCELPDLP 723
Human 724 SSLLLPEDMALRNLPPLRAAHRRFNFDT-DRPLLSTLEESVVRICCIRSFGHFIAR--------- 778
Human 779 ----------------------------------------------------------------- 778
Human 779 ----------LQGSILQFNPEVGIFV------------SIAQSEQESLLQQAQAQFRMAQEEAR- 820
Human 821 --RNRLMRDMAQLRLQLEVSQLEGSLQQPKAQSAMSPYLVPDTQALCHHLPVIRQLATSGRFIVI 883
Human 884 IPRTVIDGLDLLKKEHPGARDGIRYLEAEFKKGNRYIRCQKEVGKSFERHKLK---RQDADAWTL 945
Human 946 YKILDSCKQLTLAQGAGEEDP------SGMVTIITGLPLDNPSVLSGPMQAALQAAAHASVDIK- 1003
Human 1004 -NVLDFYKQWK 1013 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SMG5 | NP_056142.2 | EST1 | 77..187 | CDD:287360 | 38/125 (30%) |
TPR repeat | 172..206 | CDD:276809 | 12/38 (32%) | ||
EST1_DNA_bind | 197..>412 | CDD:287359 | 59/268 (22%) | ||
TPR repeat | 211..241 | CDD:276809 | 12/29 (41%) | ||
TPR repeat | 246..268 | CDD:276809 | 7/21 (33%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 408..561 | 49/215 (23%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 594..637 | 3/42 (7%) | |||
PIN_Smg5 | 855..1013 | CDD:189054 | 50/168 (30%) | ||
Smg5 | NP_001285914.1 | EST1 | 99..222 | CDD:287360 | 36/122 (30%) |
EST1_DNA_bind | 240..478 | CDD:287359 | 60/272 (22%) | ||
PIN_Smg5 | 1012..1173 | CDD:189054 | 50/168 (30%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165160313 | |
Domainoid | 1 | 1.000 | 59 | 1.000 | Domainoid score | I10741 |
eggNOG | 1 | 0.900 | - | - | E1_KOG2162 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 196 | 1.000 | Inparanoid score | I3823 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG45620 | |
OrthoDB | 1 | 1.010 | - | - | D102776at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0008183 | |
OrthoInspector | 1 | 1.000 | - | - | oto90648 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_107519 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR15696 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R5305 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
14 | 13.800 |