DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PSD3 and Efa6

DIOPT Version :10

Sequence 1:NP_001399795.1 Gene:PSD3 / 23362 HGNCID:19093 Length:1175 Species:Homo sapiens
Sequence 2:NP_001163691.2 Gene:Efa6 / 42665 FlyBaseID:FBgn0051158 Length:1601 Species:Drosophila melanogaster


Alignment Length:1265 Identity:362/1265 - (28%)
Similarity:534/1265 - (42%) Gaps:332/1265 - (26%)


- Green bases have known domain annotations that are detailed below.


Human     3 DESSSPSMGWKHWPVTSATQDLWGMDPRC--------RDALGCSPPRAVLVHAADGAERTVLRRG 59
            ::.|:.|:|     ..||.|.|..:..|.        |||:.|:.      .:..|:..|.::..
  Fly   555 EDYSTNSLG-----SGSAKQRLRALKQRTATRQQQRNRDAVDCAG------RSGSGSSSTTVKSE 608

Human    60 AETCQILPRSCKEATGTTAQATRAWLYRYCPAV--HTSKGCPAPPATLPLKAETFVWVNNASAHS 122
            |....:...|....|...:.:|        |.:  .|:...|..|....|..|     :::.|.:
  Fly   609 AGGLGLDETSFSVPTSPISLST--------PLIDKETANSVPTSPEPSSLVPE-----SSSGAGA 660

Human   123 QSVAKAKYE-----------FLFGRSEGKAPDTSDHGGSTLLPPNVTNEFPEYGTMEEGGEGLRA 176
            .:|...::.           |...:||.........|.:.::|.::.         |:....|..
  Fly   661 GAVVVRRHNGHVVRKCDAAGFRTSKSEDHLQQIQREGIAAVIPIDID---------EDVNSSLNT 716

Human   177 SLEFDGEALPCHPQEQQGVQPLTGCHSGLDS-VTEGPK-DVREAPSQSHLKEQSL------QPID 233
            .|:...::     ::.|.:..:...:|.|.| ..||.: |.|.:.|.|:..:.:.      :|..
  Fly   717 LLDTRQDS-----EDSQSMATVIVNNSSLASNNNEGEQTDNRSSSSSSNSSDNNNCSSNTGEPAT 776

Human   234 SLISALKATEARIISGTLQAT-------------KVLDQD-AVSSFSVQQVEKELDTASRKTQRV 284
            |..:...||   ||:.|...|             |..|:| .|.:::......:|....|:.|:.
  Fly   777 SETATATAT---IITATSTRTMNCSSKLNYILCKKASDRDRIVWTYNAPLQPHQLAALQRQQQQQ 838

Human   285 NKTLPAGQKNLPEIPLSAEVTTEESFYLSIQKDLTALLTGDTQAEI--SQIMNNGRKGAV----- 342
            .:.....|:.|.:..|..:...::......|:.     ....|.::  .|..:|....::     
  Fly   839 EQQFQQQQQQLHQQHLQQQQQLQQQHQQQQQQQ-----QQQQQQQLYGQQSHSNSHSSSISSSPQ 898

Human   343 --CVQEPSCPLASLGSSAVTCHSAGSVGFL------------KEQRSALGREH------------ 381
              .|..|:.| .|:.||.::  |:||.|.|            .:|:....||.            
  Fly   899 HSAVGSPASP-TSVSSSVMS--SSGSKGALGLGSSSNGPMAAVQQQQLREREQGGQVAQPPSGIP 960

Human   382 ------PGGCDRSSSMGRPGRVKHVEFQGVEILWTGGDKRETQHPIDFETSLQRTASPDSKESSK 440
                  .|||..:...|..|               ||...:.    ....::...:|||.::.. 
  Fly   961 GLLSCPGGGCGNNGGGGGIG---------------GGGNNDQ----SVSEAISNISSPDYQDDD- 1005

Human   441 VPRHLISSAGLCNSSSLTENVWDESWKAPSERPGTSSGTFSPVRLDESGEDEVFLQENKQHL--- 502
               :|:||..:.....|::         ||:...|       :.:.::...:  .|:.||.|   
  Fly  1006 ---NLLSSRDILGGMVLSD---------PSDSDST-------ILVSDAAAHQ--RQQLKQQLRAQ 1049

Human   503 -EKTPKPERDRERISEQEEH-----VKGEDEDILGPGYTEDSTDVYSSQFETILDNTSLYYSAES 561
             ::..:.||||:|..||.||     |:|.|.:..|...|...                   |.|.
  Fly  1050 QQQQRERERDRDRDREQSEHKVVIQVRGLDSNSSGGNGTNGR-------------------SEED 1095

Human   562 LETLYSEPDSYFSFEMPLTPMIQQRIKEGGQFLERTSGGGHQDILSVSADGGIVMGYSSGVTNGL 626
            :.||..||                                              :|   .:|.|:
  Fly  1096 VVTLTDEP----------------------------------------------LG---TMTVGM 1111

Human   627 NDASDSIYTKGTPEIAFWGSNAGVKTTRLEAHSEMGSTEILEKETPENLSNGTSSNVEAAKRLAK 691
            .|||        |.::..||:..      ..||...|.:.::              :.:|.||||
  Fly  1112 RDAS--------PPVSDDGSDVE------SLHSYHYSPKAVD--------------MPSAIRLAK 1148

Human   692 RLYQLDRFKRSDVAKHLGKNNEFSKLVAEEYLKFFDFTGMTLDQSLRYFFKAFSLVGETQERERV 756
            ||:.||.||:|||::||.|||:||:.||:||||.|.|...:|||:||.|.:.|||.|||||||||
  Fly  1149 RLHSLDGFKKSDVSRHLSKNNDFSRAVADEYLKHFTFEKKSLDQALREFLQQFSLSGETQERERV 1213

Human   757 LIHFSNRYFYCNPDTIASQDGVHCLTCAIMLLNTDLHGHNIGKKMTCQEFIANLQGVNEGVDFSK 821
            |:|||.|:..|||.|..|||.||.||||||||||||||.||.:||:|.||:.||..:|:|.:|.|
  Fly  1214 LVHFSKRFLDCNPGTFNSQDAVHTLTCAIMLLNTDLHGQNINRKMSCAEFVDNLADLNDGENFPK 1278

Human   822 DLLKVKLSQFFSSLVFGHHYFRISTCSSALAALYNSIKNEKLEWAVDDEEKKKSPSESTEEKANG 886
            |:||                           :||.:||.:.||||:|:|     ..:..:::||.
  Fly  1279 DVLK---------------------------SLYQAIKTKPLEWALDEE-----AGDLQQQRANN 1311

Human   887 THPKTISRIGSTTNPFLDIPHDPNAAVYKSGFLARKIHADMDGKKTPRGKRGWKTFYAVLKGTVL 951
            :   .:..:|  .|||||.|....|..||.|::.||...|...||||.|||.||.||..|:..||
  Fly  1312 S---ALGNVG--LNPFLDPPELATAVEYKKGYVMRKCCYDSSFKKTPFGKRSWKMFYCTLRDLVL 1371

Human   952 YLQKDEYKPEKALSEEDLKNAVSVHHALASKATDYEKKPNVFKLKTADWRVLLFQTQSPEEMQGW 1016
            ||.|||:...|:...::|.||:.:|||||:||.||.||.:||:|:|||....||||...:|:|.|
  Fly  1372 YLHKDEHGFRKSQMSDNLHNAIRIHHALATKANDYTKKQHVFRLQTADQAEYLFQTSDSKELQSW 1436

Human  1017 INKINCVAAVFSAPPFPAAIGSQKKFSRPLLPATTTKLSQEEQLKSHESKLKQITTELAEHRSYP 1081
            :..||.|.|..||||....:||||:|.|||||:..:||..:|||.|||.:|.|:..||.||:..|
  Fly  1437 VETINYVCAAISAPPLEGGVGSQKRFQRPLLPSKQSKLMLKEQLDSHEVQLAQLDQELNEHKKGP 1501

Human  1082 PDKKVKAKDVDEYKLKDHYLEFEKTRYEMYVSILKEGGKELLSNDESEAAGLKKSHSSPSLNPDT 1146
            ...|..|  :..||.|:.||::|..||..|||||  ..|.|....:.|....:.|.:|.....||
  Fly  1502 IPSKGLA--LQNYKEKESYLQYELRRYRTYVSIL--SAKMLADQQQLELQAQQPSPASHEEEADT 1562

Human  1147 SPI--TAKVKRNVSERKDHRPETP-SIKQK 1173
            .|:  ||..           |.|| ||.||
  Fly  1563 FPVGTTACT-----------PPTPQSINQK 1581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PSD3NP_001399795.1 Sec7 682..863 CDD:238100 95/180 (53%)
PH_EFA6 908..1033 CDD:270107 62/124 (50%)
Efa6NP_001163691.2 PDZ_canonical 6..85 CDD:467153
PHA03269 225..>344 CDD:165527
Sec7 1124..1293 CDD:238100 98/215 (46%)
PH_EFA6 1330..1452 CDD:270107 61/121 (50%)
Blue background indicates that the domain is not in the aligned region.

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