DRSC/TRiP Functional Genomics Resources

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Protein Alignment TRIM2 and tn

DIOPT Version :10

Sequence 1:NP_001362417.1 Gene:TRIM2 / 23321 HGNCID:15974 Length:802 Species:Homo sapiens
Sequence 2:NP_001137707.1 Gene:tn / 37190 FlyBaseID:FBgn0265356 Length:1517 Species:Drosophila melanogaster


Alignment Length:431 Identity:139/431 - (32%)
Similarity:207/431 - (48%) Gaps:56/431 - (12%)


- Green bases have known domain annotations that are detailed below.


Human   407 TTKDKDGELCKTGNAYLT---AELSTPDGSVADGEILDNKNG-----------TYEFLYTVQKEG 457
            ||..||||...:...||.   ...|:.|.:.:.|...|...|           ::...|.....|
  Fly  1104 TTDSKDGEALSSWARYLKNKYGNKSSKDSAGSSGSARDTHAGSSTSSSAAASSSHAHGYGSGTSG 1168

Human   458 --------DFTLSLRLYDQHIRGSPFK-LKVIRSAD--------VSPTTEGVKRRVKSPGSGHVK 505
                    |.:..|.|      |.|.: ...:.|:|        .|||:..|...|.:.|   :.
  Fly  1169 SSGRSTASDVSRRLSL------GLPLRQANELASSDDDGSKNGLGSPTSPTVAAAVAAAG---IT 1224

Human   506 QKAVKRPASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQI 570
            ..|...|..:| ..||::       :|::|.:|...|.||..:|:|...:..|::|||:|..||:
  Fly  1225 GAAGTIPKQVY-LRKRQQ-------LFQLGGRGSEPGSFTWPRGLAVGPDNSIVVADSSNHRVQV 1281

Human   571 FSNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS----- 630
            |.::|.|...||..|...|:.....||||:..|..||||..|..:.:....|:|....||     
  Fly  1282 FDSNGIFVKEFGEYGNGEGEFDCLAGVAVNRIGQYIIADRYNHRIQVLDPQGRFLRAFGSQGTAD 1346

Human   631 GKLMGPKGVSVDRNGHIIVVDNKACCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEII 695
            ||...|.||:.|..|.|.|.|.:...|.:||.:|..|.:|||.|.|:.|...||:.||::.|.:|
  Fly  1347 GKFNYPWGVTTDALGFIYVCDKENHRVQVFQSDGSFVGKFGSCGRGEGQLEHPHYIAVSNTNRVI 1411

Human   696 ITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGSF 760
            ::|.:||.:::|:..|:.:...|..|..:|||..|.|||||..|.|.|||.||:|||:|:..|||
  Fly  1412 VSDSNNHRIQIFDVNGKVLSTVGGEGSDDGQFKFPRGVAVDDQGYIFVADSGNNRIQIFNPDGSF 1476

Human   761 LSYINT--SADPLY-GPQGLALTSDGHVVVADSGNHCFKVY 798
            |....:  |.|..: |.:|:|:.|:|:::|.|..||..:|:
  Fly  1477 LKTFGSWGSGDSEFKGLEGVAIMSNGNILVCDRENHRVQVF 1517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TRIM2NP_001362417.1 RAD18 33..>136 CDD:227719
RING-HC_TRIM2 42..92 CDD:438423
Bbox_SF 142..214 CDD:469587
BBC 219..345 CDD:128778
IG_FLMN 383..479 CDD:214720 20/94 (21%)
NHL_TRIM2_like 529..802 CDD:271330 106/278 (38%)
NHL repeat 547..586 CDD:271330 14/38 (37%)
NHL repeat 594..633 CDD:271330 15/43 (35%)
NHL repeat 636..673 CDD:271330 15/36 (42%)
NHL repeat 680..721 CDD:271330 12/40 (30%)
NHL repeat 727..769 CDD:271330 23/43 (53%)
NHL repeat 772..798 CDD:271330 9/26 (35%)
tnNP_001137707.1 RING-HC_NHL-1-like 3..55 CDD:438187
CC_brat-like 124..232 CDD:475168
NHL_TRIM71_like 1234..1517 CDD:271324 108/290 (37%)
NHL repeat 1258..1297 CDD:271324 14/38 (37%)
WD40 repeat 1261..1304 CDD:293791 15/42 (36%)
NHL repeat 1305..1344 CDD:271324 14/38 (37%)
WD40 repeat 1345..1377 CDD:293791 11/31 (35%)
NHL repeat 1352..1388 CDD:271324 14/35 (40%)
NHL repeat 1396..1436 CDD:271324 12/39 (31%)
WD40 repeat 1402..1439 CDD:293791 11/36 (31%)
NHL repeat 1445..1475 CDD:271324 17/29 (59%)
WD40 repeat 1446..1485 CDD:293791 21/38 (55%)
NHL repeat 1491..1517 CDD:271324 9/25 (36%)
Blue background indicates that the domain is not in the aligned region.

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