DRSC/TRiP Functional Genomics Resources

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Protein Alignment CUX2 and COY1

DIOPT Version :10

Sequence 1:NP_056082.2 Gene:CUX2 / 23316 HGNCID:19347 Length:1486 Species:Homo sapiens
Sequence 2:NP_012742.1 Gene:COY1 / 853675 SGDID:S000001662 Length:679 Species:Saccharomyces cerevisiae


Alignment Length:465 Identity:114/465 - (24%)
Similarity:196/465 - (42%) Gaps:95/465 - (20%)


- Green bases have known domain annotations that are detailed below.


Human    12 WKRFDLRRLQKELNSVASELSARQEESEHSHKHLIELRREFKKNVPEEIREMVAPVLKSFQAEVV 76
            |.:.||..||:||::...|:..::..|.:|.|.|....::|||..|||....|..::|.:|.|:.
Yeast    13 WAKADLTNLQRELDADVIEIKDKETLSLNSRKSLATETKKFKKLEPEEKLNNVNKIIKQYQREID 77

Human    77 ALSKRSQEAEAAFLSVYKQLIEAPDPVPVFEAA----RSLDDRLQPPSFDPSGQPRRDLHTSWKR 137
            .|::||:.:|.....||::|.|||||.|:.:::    ..:||.                    |.
Yeast    78 NLTQRSKFSEKVLFDVYEKLSEAPDPQPLLQSSLEKLGKIDDS--------------------KE 122

Human   138 NPELLSPKEQREGTSPAGPTLTEGSRLPGIPGKALLTETLLQRNEA----------EKQKGLQEV 192
            ..|.:|..|.:........||.  |||..:...:  .:||.:|..|          ||.:..:|.
Yeast   123 LKEKISYLEDKLAKYADYETLK--SRLLDLEQSS--AKTLAKRLTAKTQEINSTWEEKGRNWKER 183

Human   193 QITLAARLGEAEEKIKVLHSALKATQAELLELRRKYDE---------EAASKADEVGLIMTNLEK 248
            :..|..:|...:|:.|    ||:|..::.:::....:|         |.:::..|..|:...||.
Yeast   184 EADLLKQLTNVQEQNK----ALEAKISKNIDIEGNGNEDGDQENNQKEVSTRIAEYNLVTQELET 244

Human   249 ANQRAEAAQREVESLREQLASVNSSIRLACCSPQGPSGDKVNFTLCSGPRLEAALASKDREILRL 313
            ...|....::..|.|...||...|            ..:|           |..|.:|:.::.:|
Yeast   245 TQARIYQLEKRNEELSGALAKATS------------EAEK-----------ETELHAKELKLNQL 286

Human   314 LKDVQHLQSSLQELEEASANQIADLERQL---TAKSEA----IEKLEEKLQAQSDYEEIKTELSI 371
            ..:...|.:|.::..:::::.|.:|:.||   .|:||:    :|.:..||...|||.:||.|||.
Yeast   287 ESENALLSASYEQERKSTSHAINELKEQLNSVVAESESYKSELETVRRKLNNYSDYNKIKEELSA 351

Human   372 LKAMKLASSTCSLPQGMAKP-------EDSLLIAKEAFFPTQKFLLEKPSLLASPEEDPSE---- 425
            ||.::...:.......:...       |.|||.|.:..   |..|.|..|...:.||:.:|    
Yeast   352 LKKIEFGVNEDDSDNDIRSEDKNDNTFESSLLSANKKL---QATLAEYRSKSTAQEEERNELKKS 413

Human   426 DDSIKDSLGT 435
            .|.:|..:.|
Yeast   414 VDQLKQQIAT 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CUX2NP_056082.2 PRK03918 <17..>269 CDD:235175 68/274 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 114..167 10/52 (19%)
Smc <179..>379 CDD:440809 51/225 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 415..481 6/25 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 517..549
CUT 553..625 CDD:460543
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 661..690
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 716..758
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 800..858
CUT 892..965 CDD:460543
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 964..1032
CUT 1043..1119 CDD:460543
Homeodomain 1169..1225 CDD:459649
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1231..1453
COY1NP_012742.1 SMC_N <16..335 CDD:481474 86/369 (23%)
SMC_prok_B 225..>436 CDD:274008 53/225 (24%)
CASP_C 409..638 CDD:462392 4/15 (27%)
Blue background indicates that the domain is not in the aligned region.

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