DRSC/TRiP Functional Genomics Resources

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Protein Alignment FBXW11 and btrc

DIOPT Version :10

Sequence 1:NP_001365903.1 Gene:FBXW11 / 23291 HGNCID:13607 Length:563 Species:Homo sapiens
Sequence 2:XP_012822030.1 Gene:btrc / 549140 XenbaseID:XB-GENE-486122 Length:610 Species:Xenopus tropicalis


Alignment Length:590 Identity:468/590 - (79%)
Similarity:505/590 - (85%) Gaps:43/590 - (7%)


- Green bases have known domain annotations that are detailed below.


Human    16 CSVPRSLWLGCANLVESMCALSCLQSMPSVRCL---QNTSVMEDQNEDESPK-----KNTLWQ-- 70
            |.||:||||||::||:||.:|.||.: |....|   |..|..||.|.||.|:     ||||.|  
 Frog    22 CPVPKSLWLGCSSLVDSMPSLQCLYN-PGTGALTTFQTASEREDCNRDEPPRKIIPEKNTLRQTS 85

Human    71 ------------------------------ISNGTSSVIVSRKRPSEGNYQKEKDLCIKYFDQWS 105
                                          ::|||||:||.::|....||:|||:||:|||:|||
 Frog    86 NNCASLCITQDTVCLSGSAMKTESCVVKTKLANGTSSMIVPKQRKLSANYEKEKELCVKYFEQWS 150

Human   106 ESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSYLDARSLCAAEL 170
            |.||||||||||||||||||||||:|||||||||||||||.:|||||||||||||||||||:|||
 Frog   151 ECDQVEFVEHLISRMCHYQHGHINTYLKPMLQRDFITALPARGLDHIAENILSYLDARSLCSAEL 215

Human   171 VCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRPTDG--PPNSFYRSLYPKI 233
            |||||.||.|:|||||||||||||||.||:||:|||||.||||||:|.||  |||||||:|||||
 Frog   216 VCKEWYRVTSDGMLWKKLIERMVRTDSLWRGLAERRGWGQYLFKNKPPDGKTPPNSFYRALYPKI 280

Human   234 IQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLT 298
            ||||||||||||||||:||||.||||.|||||||||||:||:||||||:||||||.:|||.:||.
 Frog   281 IQDIETIESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRVLM 345

Human   299 GHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSI 363
            ||||||||||||||||:|||||||||||||||||:|||||||.||||||||:||:||||||||||
 Frog   346 GHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSI 410

Human   364 AVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIA 428
            ||||||||||||||||||||||||||||||||||||||||||||||:||||||||||||||||||
 Frog   411 AVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA 475

Human   429 CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQA 493
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|
 Frog   476 CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVA 540

Human   494 ALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTY 558
            ||||||||.||||||||||||||||||||||||:|||||||||||||||.|.:....||||||||
 Frog   541 ALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPAAHAESTRSPSRTY 605

Human   559 TYISR 563
            |||||
 Frog   606 TYISR 610

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FBXW11NP_001365903.1 Beta-TrCP_D 99..137 CDD:463465 34/37 (92%)
F-box_FBXW1B 137..187 CDD:438954 43/49 (88%)
WD40 repeat 264..299 CDD:293791 27/34 (79%)
WD40 <270..539 CDD:441893 251/268 (94%)
WD40 repeat 305..339 CDD:293791 31/33 (94%)
WD40 repeat 344..381 CDD:293791 34/36 (94%)
WD40 repeat 388..421 CDD:293791 31/32 (97%)
WD40 repeat 427..461 CDD:293791 33/33 (100%)
WD40 repeat 467..510 CDD:293791 40/42 (95%)
WD40 repeat 516..538 CDD:293791 20/21 (95%)
btrcXP_012822030.1 Beta-TrCP_D 144..182 CDD:463465 34/37 (92%)
F-box_FBXW1A 180..239 CDD:438953 52/58 (90%)
WD40 308..586 CDD:238121 260/277 (94%)
WD40 repeat 311..346 CDD:293791 27/34 (79%)
WD40 repeat 352..386 CDD:293791 31/33 (94%)
WD40 repeat 391..428 CDD:293791 34/36 (94%)
WD40 repeat 435..468 CDD:293791 31/32 (97%)
WD40 repeat 474..508 CDD:293791 33/33 (100%)
WD40 repeat 514..557 CDD:293791 40/42 (95%)
WD40 repeat 563..585 CDD:293791 20/21 (95%)

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