DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment WWC1 and SPAC167.07c

DIOPT Version :9

Sequence 1:XP_011532787.1 Gene:WWC1 / 23286 HGNCID:29435 Length:1185 Species:Homo sapiens
Sequence 2:NP_593378.1 Gene:SPAC167.07c / 2542770 PomBaseID:SPAC167.07c Length:1029 Species:Schizosaccharomyces pombe


Alignment Length:614 Identity:118/614 - (19%)
Similarity:203/614 - (33%) Gaps:190/614 - (30%)


- Green bases have known domain annotations that are detailed below.


Human   487 LSSSMQSLSSGSSPGSLTSSRGSL------VASSLDSSTSASFTDLYYDPFEQLDSELQSKVEFL 545
            |:..:.|::|....|:.||:..||      ||..|.||..::    |||......:::..|....
pombe   171 LNCLVSSINSHRIEGTDTSAETSLLHCLAYVAPYLKSSELST----YYDSVMTFYAQIYPKQNMT 231

Human   546 LLEGATGFRPSGCITTIHE--DEVAKTQKAEGGGRLQALRSLSGTPKSMTSLSPRSSLSSPSPPC 608
            .||.....   ..:|.:..  ||.|.:..|   .....|.|           ...||:.:..|| 
pombe   232 NLEDIMSL---SLLTPVSSKTDENANSSSA---FLFHVLAS-----------DCFSSIENCIPP- 278

Human   609 SPLMADPLLAGDAFLNSLEFEDPELSATLCELSL-------GNSAQERYRLEEPGTEGKQ----- 661
                  .|:....|.:||:..:....::|..|.:       ||.      |....||.|.     
pombe   279 ------DLIIDKVFSSSLQLSEEACISSLLNLGMIKVFSLAGNC------LHLLHTEYKNSSLWK 331

Human   662 ------------LGQAVNTAQGCGLKVACVSAAVSDESVAGDSGV----YEASVQRLG------- 703
                        .|::||:      ::..||....||.   |...    |.:.:|.:.       
pombe   332 FCSYILDALYVFSGESVNS------RIQVVSDVDDDED---DENAFSQNYYSHLQMVAKHFSKNY 387

Human   704 ASEAAAFDSDESEAVGATRIQIALKYDEKN-----KQFAILIIQL--SNLSALLQQQDQKVNIRV 761
            |:::.......:|.:.:|.|..|.|....|     ..|...:|:|  ||.:::|        :.:
pombe   388 ANQSGIVQRSFAECISSTFITKAFKLVSSNTLQAMSHFYATMIKLFPSNRTSIL--------MYI 444

Human   762 AVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCTTDRSHLEECLGGAQI 826
            :::..:|.:.    ||........:|:|    |..|...|:|....:|...|..:..:    .|:
pombe   445 SLVETNEGSL----TRSFSRFSWDMFSE----SPVYQLFHKKFDVQNVLKNDSGYWFQ----LQL 497

Human   827 SLAEVCRSGERSTRWYNLLSYKYLKKQSRELKPVGVMAP----ASGPASTVSWDQDAVSALLEQT 887
             |.:|     .|...:.::..::...:...|.|  |||.    .......:.||..|...:..::
pombe   498 -LIDV-----YSRMLFTMIDDEFHNDKQNPLYP--VMAEFCTVLKNLVLGLYWDVQAAKDVDCKS 554

Human   888 AVELEKRQEGRSSTQTLEDSWR-----------------YEETSENEAVAEEEEEEVEEEEGEED 935
            .|::.:.:.  |||..|:..:|                 |...:|.||.|.:|.|.....|.|.:
pombe   555 VVDISQLRV--SSTSLLQQLYRINSRKQFLPEDFFLMSEYFNLNEFEANALQESELASHAEAEIN 617

Human   936 VFTEKASPDMDGYPALKV-----------------------DKETNTETPAPSPTVVRPKDRRVG 977
            : |.|.....:..|.|.:                       ||:.|....               
pombe   618 I-TYKFDNFSESRPRLNILNNCSFFLPFHFRIHLLQQLLLLDKQANGYAQ--------------- 666

Human   978 TPSQGPF--LRGSTIIRSKTFSPGPQSQY 1004
                 ||  |:.:.|.|::.|..|..:.|
pombe   667 -----PFGHLKHAVIRRNRIFDDGFDAFY 690

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WWC1XP_011532787.1 WW 9..39 CDD:238122
WW 55..84 CDD:278809
ALDH-SF 429..>481 CDD:299846
C2_Kibra 721..844 CDD:176062 26/129 (20%)
SPAC167.07cNP_593378.1 HUL4 155..1029 CDD:227354 118/614 (19%)
HECTc 676..1027 CDD:238033 5/15 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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