DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment WWC1 and ubr-5

DIOPT Version :9

Sequence 1:XP_011532787.1 Gene:WWC1 / 23286 HGNCID:29435 Length:1185 Species:Homo sapiens
Sequence 2:NP_492389.1 Gene:ubr-5 / 172697 WormBaseID:WBGene00009460 Length:2944 Species:Caenorhabditis elegans


Alignment Length:1132 Identity:211/1132 - (18%)
Similarity:366/1132 - (32%) Gaps:364/1132 - (32%)


- Green bases have known domain annotations that are detailed below.


Human    75 NTKTTQIEDPRVQWRREQEHMLKDYLVVAQ-EALSAQ----KEIY----------QVKQQRL--E 122
            |..|.|   |.::..|||..:....||.|. :.||..    ..:|          |:|.|||  :
 Worm  1963 NDNTDQ---PSLETAREQLALTFSVLVRAGCDILSRMPRPVMSVYTKADDNAKRSQLKAQRLFGD 2024

Human   123 LAQQEYQQLHAVWEHKLGS-------QVSLVSGSSSSSK----------YDPEILKAEIATAKSR 170
            :.|..::.:..|:|.....       :.|||..:|..|:          |...:|:.....||..
 Worm  2025 ILQDTFRWMGRVFESTEAKINFNETYEKSLVRPASPGSEDKRGRKDALHYIHSLLRLATDEAKDS 2089

Human   171 VNKLKREMVH---LQHELQFK------ERGFQTLKKIDKKMSDAQGSYKLDEAQAVLRETKAIKK 226
            :..:..||::   |..:..|.      ||..:..:.||         |..|..:...||      
 Worm  2090 LAHVDIEMLYPVALVADAYFHFLSCNVERPIELKQLID---------YYEDSQRRHFRE------ 2139

Human   227 AITCGEKEKQDLIKSLAMLKDGFRTDRGSHSDLWSSSSSLESSSFPL-----------PKQYLDV 280
              .| |:...||:....|...........|...|.:.|.....|..|           ||....:
 Worm  2140 --KC-EQTDNDLMIGFFMRPVSLSWPGHLHDGAWDTLSGRHHISKTLKIEEECPMLGGPKMLTML 2201

Human   281 SSQTDISGSFGINSNNQLAEKVRLRLRYEEAKRRLSCQCGQATPSNSELTH--------YQLPQA 337
            :.|.|:           ..:.|     .:|.|||.|.......   .|.|:        |:.|..
 Worm  2202 TKQEDL-----------FRDPV-----IDETKRRTSSYLNDPV---EEYTYNLLDRPFEYRNPGV 2247

Human   338 SSKTARH-LYLDSHFLFSLKRTTLNLGSVPSCRNACLRWIANLKIQLAKLDSEAWPGVLDSERDR 401
            |.....| |.|:..|: |:.|...:|...|.      ..:.:....:.|     :||.:....|.
 Worm  2248 SLAMVPHRLKLEREFI-SITRDFYHLDRTPD------HEVKDYSTAVGK-----FPGYIGRLDDS 2300

Human   402 LILINEKEELL-----KEMRFISPRKWTQGEVEQLEMARKRLEKDLQAARDTQSKALTERLKLN- 460
            :...  |:.||     :|..:.|  ||.               |.|.|..:.....:||.|..: 
 Worm  2301 ISKF--KDNLLIHSCNRERLYFS--KWF---------------KTLNAIGNRFYDKMTEALGADV 2346

Human   461 SKRNQLV-----------RELEEATRQVATLHSQLKSL--------------------------S 488
            :..|.::           |...:||.:..|.||.:|.:                          .
 Worm  2347 AFENSIMLRRLASFETKQRLFNKATEKYRTQHSNVKEIVLDVRREPGSLFRDTMVQLHHLYAKRM 2411

Human   489 SSMQSLSSGSSPGSLTSSRGSLVASSLDSSTSASFTDLYYDPFEQLDSELQSKVEFLLLEGATGF 553
            .|::||.||.:|.:.|..|...:.   :.......|..:|..|          .|..:::.|. |
 Worm  2412 MSVRSLESGHAPLAGTRLRVHFID---EPGEGTGVTRSFYTAF----------AESCMMDVAP-F 2462

Human   554 RP------SGCITTI--------HEDEVAKT-QKAEGGGRLQALR------SLSGTPKSMTSLSP 597
            .|      |..|.::        |:.|:.|| :||.   |.||:|      .|...|.::.  :|
 Worm  2463 TPETVAEKSSLIQSVLHPNNEYEHDMEITKTLRKAR---REQAIRLRTHLQRLKTFPLNLA--AP 2522

Human   598 RSSL-----------------SSPSPPCSPLMADPLLAGDAFLNSLEFEDPELSATLCELSLGNS 645
            |..:                 |:.|.|.:|            ||..:.|     .||.::....|
 Worm  2523 RFDIKNFTGEGNWTKKVLQDSSAESQPVAP------------LNWGQHE-----GTLRKIHTMTS 2570

Human   646 AQERYRLEEPGTEGKQLG-----------QAVNTAQGCGLKVACVSAAVSDESVAGDSGVYEASV 699
            .    .|.:..|.|:.:|           :|||......|.:..:.|.:..|   |:...|....
 Worm  2571 G----FLTDEKTIGRVMGIMCQLPTEVFVKAVNNDDTMRLHIQQILAELRAE---GELDDYSRVF 2628

Human   700 QRLGASEAAAFDSDESEAVGATRIQIALKYDEKNKQFAILIIQLSN---------------LSAL 749
            :.|..:|....|.::...:..|...:...: ||.......:.::.|               :...
 Worm  2629 RGLQNAEQPRSDDEQWNVLVGTESPLDQLF-EKAPYGEFYVPKIGNGAPMRLAAYRTVGRIMGIC 2692

Human   750 LQQQD-------QKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRV 807
            |.|.|       :.:...:..||     .|..   .|...|.::||.:..:..::|:      .:
 Worm  2693 LSQGDIFPLRFSRHIFSYILKLP-----ICWL---DLGFYDPVLFNNLRALFKAHPS------EL 2743

Human   808 DVCTTDRSHLEECLGGAQIS-----------------LAEVCRSGERSTRWYNLLSYKYLKKQSR 855
            |   ||.|.:|:...|..::                 :..|.:..||......:::::.:::...
 Worm  2744 D---TDFSIVEQSADGKAVTVNLKPNGDEVLVNKDNVIEYVYKYAERVLVGKRIITFEAIREGIL 2805

Human   856 ELKPVGV---MAPASGPASTVSWDQDAVSALLEQTAVELEKRQEGRSSTQTLE--DSWRYEETSE 915
            ::.|..:   :.|..........:..::|.|.|.|..    ..|.|:|.:||.  ..|.::..  
 Worm  2806 DVIPESMLFGLTPEDLRLIICGIESVSISVLQENTGF----LDESRASQETLNRFKQWFWQVI-- 2864

Human   916 NEAVAEEEEEEVEEEEGEEDVFTEKASPDMDGYPALKVDKETNTETPAPSPTVVRPKDRRVGTPS 980
             |:..::|::|:        ||....||.:   ||.       .:.|..:..::||:        
 Worm  2865 -ESFTQQEKQEL--------VFFWTGSPAL---PAA-------GKWPTSASVMLRPQ-------- 2902

Human   981 QGPFLRGSTIIRSKTFSPGPQSQYVCR 1007
            :..||..:....|:.:.|...|:.|.|
 Worm  2903 EDVFLPTANTCISRLYVPVYSSKRVLR 2929

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WWC1XP_011532787.1 WW 9..39 CDD:238122
WW 55..84 CDD:278809 3/8 (38%)
ALDH-SF 429..>481 CDD:299846 11/63 (17%)
C2_Kibra 721..844 CDD:176062 24/161 (15%)
ubr-5NP_492389.1 E3_UbLigase_EDD 182..233 CDD:288409
ZnF_UBR1 1202..1271 CDD:197698
HECTc 2576..2942 CDD:238033 69/408 (17%)
HECTc 2614..2941 CDD:214523 61/370 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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