DRSC/TRiP Functional Genomics Resources

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Protein Alignment NUP160 and NUP120

DIOPT Version :10

Sequence 1:NP_056046.2 Gene:NUP160 / 23279 HGNCID:18017 Length:1402 Species:Homo sapiens
Sequence 2:NP_012866.1 Gene:NUP120 / 853808 SGDID:S000001540 Length:1037 Species:Saccharomyces cerevisiae


Alignment Length:1247 Identity:207/1247 - (16%)
Similarity:388/1247 - (31%) Gaps:456/1247 - (36%)


- Green bases have known domain annotations that are detailed below.


Human    85 LDINLL--------NNAIRL----------------------------KFQNCSVLPGGVYVS-- 111
            :|.|||        ||.:.|                            ::.||.:|....|:.  
Yeast     7 IDANLLQYYEKPEPNNTVDLYVSNNSNNNGLKEGDKSISTPVPQPYGSEYSNCLLLSNSEYICYH 71

Human   112 -ETQNRVIILMLTNQTVH----RLLLPHPSRMYRSELVVDSQMQSIFTDIGKVDFTDPCNYQLIP 171
             .:::.::.....:...|    .:.||:.|...|..|.:....|.:..::               
Yeast    72 FSSRSTLLTFYPLSDAYHGKTINIHLPNASMNQRYTLTIQEVEQQLLVNV--------------- 121

Human   172 AVPGISPNSTASTAWLSSDGEAL-FALPCA---------SGGIFVLKLPPYD----IPGMV---- 218
                           :..||..| ..||.:         :|..|.|: .|||    :|..:    
Yeast   122 ---------------ILKDGSFLTLQLPLSFLFSSANTLNGEWFHLQ-NPYDFTVRVPHFLFYVS 170

Human   219 ---SVVELKQSSVM----------QRLL---TGWMPTAIRGDQSPSDRPLSLAVHC-VEHDAFIF 266
               |||.|:...::          :.||   ..::.:..|.....|.......:.| :.|:.::.
Yeast   171 PQFSVVFLEDGGLLGLKKVDGVHYEPLLFNDNSYLKSLTRFFSRSSKSDYDSVISCKLFHERYLI 235

Human   267 ALCQDHKLRMWSYKEQMCLMVADMLEYVPVKKDLRLTAGTGHKLRLAYSPTMGLYLGIYMHAPKR 331
            .|.|:..|::|.......:...||:.        :..:...|..::   ..:|.||.:|.:.   
Yeast   236 VLTQNCHLKIWDLTSFTLIQDYDMVS--------QSDSDPSHFRKV---EAVGEYLSLYNNT--- 286

Human   332 GQFCIFQLVSTESNRYSL-----DHISSLFTSQETLIDFALTSTDIWA-----LWHDAENQTVVK 386
                :..|:..|:..:.:     |....|..:.:..|...|:::.||:     |....|......
Yeast   287 ----LVTLLPLENGLFQMGTLLVDSSGILTYTFQNNIPTNLSASAIWSIVDLVLTRPLELNVEAS 347

Human   387 YINFEHNVAGQWNPVFMQPLPEEEIVIRDDQDPREMYLQSLFTPGQFTNEALCKALQIFCRGTER 451
            |:|.                    ||:                    ........|||.....|.
Yeast   348 YLNL--------------------IVL--------------------WKSGTASKLQILNVNDES 372

Human   452 NLDLSWSEL--KKEVTLAVENELQGSVTEYEFSQEEFRNLQQEFWCKFYACCLQYQEALSHPLAL 514
            ..:..|.|.  |..|.|..|::|. .||:....:..|.||:..:..:.:.   :.|:.||.    
Yeast   373 FKNYEWIESVNKSLVDLQSEHDLD-IVTKTGDVERGFCNLKSRYGTQIFE---RAQQILSE---- 429

Human   515 HLNPHTNMVCLLKKGYLSFLIPSSLVDHLYLLPYENLLTEDETTISD--DVDIARDVICLIKCLR 577
                             :.:|.:...|..||...|.:|.:.:|..::  .:.:..|.|.|:.|.:
Yeast   430 -----------------NKIIMAHNEDEEYLANLETILRDVKTAFNEASSITLYGDEIILVNCFQ 477

Human   578 LIEESVTVDMSVIMEMSCYNLQSPEKAAE-----QILEDMITIDVENVMEDICSKLQEIRNPIHA 637
            ....|: ..::..:|...||:.|....:|     :.|....:....:|:..|..|..:|      
Yeast   478 PYNHSL-YKLNTTVENWFYNMHSETDGSELFKYLRTLNGFASTLSNDVLRSISKKFLDI------ 535

Human   638 IGLLIREM-DYETEVE---------MEKGFNPAQPLNIRMNLTQLYGSNTAGYIVCRGVHKIAST 692
               :..|: |..|.||         :|..|   :..|:::...:|...:..              
Yeast   536 ---ITGELPDSMTTVEKFTDIFKNCLENQF---EITNLKILFDELNSFDIP-------------- 580

Human   693 RFLICRDLLILQQLLMRLGDAVIW-----------GTGQLFQAQQDLLHRTAPLLLSYYLIKWGS 746
              ::..||:..|   |:.|  :.|           |...:...:.  ||:   ||..:|.|.  .
Yeast   581 --VVLNDLINNQ---MKPG--IFWKKDFISAIKFDGFTSIISLES--LHQ---LLSIHYRIT--L 631

Human   747 ECLATDVPLDTLESNL--QHLSVLELTDSGALMANRFVSSPQTIVELFFQEVARKHIISHLFSQP 809
            :.|.|.|..| |::.:  ||:|                    |:::|.:    ::.::.:|:.|.
Yeast   632 QVLLTFVLFD-LDTEIFGQHIS--------------------TLLDLHY----KQFLLLNLYRQD 671

Human   810 KAPLSQTGLNWPEMITAITSYLLQLLWPSNPGCLFLECLMGNC----------QYVQLQDYIQLL 864
            |                               ||..|.|:.:.          .|.||..||..|
Yeast   672 K-------------------------------CLLAEVLLKDSSEFSFGVKFFNYGQLIAYIDSL 705

Human   865 HP---WCQVNVGSCRFMLGRCYLVTGEGQKAL-------EC-FCQAASEVGKEEFLDRLIRSEDG 918
            :.   ...:...|......|.|::.....|.:       || |....:||  :||:..:.....|
Yeast   706 NSNVYNASITENSFFMTFFRSYIIENTSHKNIRFFLENVECPFYLRHNEV--QEFMFAMTLFSCG 768

Human   919 EIVSTPRLQYYDKVLRLLDVIGLPELVIQLATSAITEA------GDD-WKSQATLRTCIFKHHLD 976
            .         :|:...:..:...||.:.....:.:.:.      ||. ||......|..::|   
Yeast   769 N---------FDQSYEIFQLHDYPEAINDKLPTFLEDLKSENYHGDSIWKDLLCTFTVPYRH--- 821

Human   977 LGHNSQAYEALTQIPDSSRQ----LDCLRQLVVVLCERSQLQDLVEFP------YVNL------H 1025
                |..|..|:.:.|.:..    |.|:.:......:..|:::|.:|.      |:||      .
Yeast   822 ----SAFYYQLSLLFDRNNSQEFALKCISKSAEYSLKEIQIEELQDFKEKQHIHYLNLLIHFRMF 882

Human  1026 NEVVGII--------------------------------------------ESRARAVD------ 1040
            .||:.::                                            |...|.||      
Yeast   883 EEVLDVLRLGHECLSDTVRTNFLQLLLQEDIYSRDFFSTLLRLCNAHSDNGELYLRTVDIKIVDS 947

Human  1041 LMTHNY-------YELLYAFHIYRHNYRKAGTVMFEYGMRLGREVRTLRGLEKQGNCYLAALNCL 1098
            :::.|.       ::.||.|.:...:.|.|..|:::| :.:..::..:|    :..|||..:|.|
Yeast   948 ILSQNLRSGDWECFKKLYCFRMLNKSERAAAEVLYQY-ILMQADLDVIR----KRKCYLMVINVL 1007

Human  1099 RLIRPEY-AWIV 1109
            ......| .||:
Yeast  1008 SSFDSAYDQWIL 1019

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NUP160NP_056046.2 Nup160 28..543 CDD:432020 86/547 (16%)
NUP120NP_012866.1 Nup160 91..495 CDD:432020 85/518 (16%)

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