| Sequence 1: | NP_150648.2 | Gene: | VPS13A / 23230 | HGNCID: | 1908 | Length: | 3174 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_651753.2 | Gene: | Vps13B / 43550 | FlyBaseID: | FBgn0039727 | Length: | 3731 | Species: | Drosophila melanogaster |
| Alignment Length: | 4114 | Identity: | 724/4114 - (17%) |
|---|---|---|---|
| Similarity: | 1300/4114 - (31%) | Gaps: | 1526/4114 - (37%) |
- Green bases have known domain annotations that are detailed below.
|
Human 4 ESVVVDVLNRFLGDYVVDLDTSQLSLGIWKGAVALKNLQIKENAL-SQLDVPFKVKVGHIGNLKL 67
Human 68 IIPWKNLYTQPVEAVLEEI-YLLIVPSSRIKYDPLKEEKQLMEAKQQELKRIEEAKQKVVDQEQH 131
Human 132 LPEKQDTFAEKLVTQIIKNLQVKISSIHIRY-EDDITNRDKPLSFGISLQNLSMQTTDQYWVPCL 195
Human 196 HD--ETEKLVRKLIRLDNLFAYWNVKSQMFYLSDYDNSLDDLKNGIVNENIVPEGYDF------- 251
Human 252 VFRPISANAKL--------VMNRRSDFDFSAPKINLEIELHNIAIEFNKPQYFSIMELLESVDMM 308
Human 309 AQN---------------------LPYRKFKPDVPLHH------HAREWWAYA------------ 334
Human 335 -----IHGVLEVNVCPRLWM--------------WSWKHIRK----------------------- 357
Human 358 -HRQKVKQYKELYKKKLTSKKPPGELLVSLEELEKTLDVFNIT--IARQT--------------- 404
Human 405 -------------AEVEVKKAGYKI-------------------YKEGVKD---PEDNKGWFSWL 434
Human 435 WSWSEQNTNEQQPDVQPETL-EEMLTPEEKALLYEAIGYSETAVDPTLLKTFEALKFFVHLKSMS 498
Human 499 IVLRENHQKPELVDIVIEEFSTLIVQ---------------------RPGAQAIKFETKIDS--- 539
Human 540 -----------FHITGL--------PDNSEK-----PRLLSSLDDAMSLFQITFEINPLD--ETV 578
Human 579 SQRCIIEAEPLEIIYDARTVNSIVEFFRPPKEVHLAQLTA-----ATLTKLEEFRSK-------- 630
Human 631 ----TATGLLYIIETQKV---------------------LDLKINLKASYIIVPQDGI------- 663
Human 664 ----FSPTSNLLLL------DLGHLKVT----------SKSRSELPDVKQGEANLKEIMDRAYDS 708
Human 709 FDIQLTSVQLLYSRVGDNWREARKLSV--STQHI------------------------------- 740
Human 741 ----LVPMHFNLELSKAMV-----------------FMDVRMPKFK-------------IYGKLP 771
Human 772 LISLRISDKKLQGIMELIE--SIPKPEPVTE-VSAPVK-----SFQIQTSTSLGTSQ-------- 820
Human 821 -----------------------------ISQ-----------------KIIPLLEL-------- 831
Human 832 PSVSEDDSEEEFFDAP---CSPLEEPLQF-----------PTGVKSIRTRK--LQKQDCSVNMTT 880
Human 881 F----KIRFEVPKVLIEFYH---------------LVGD-CELSVVEILVLGLGAEIEIRTYDLK 925
Human 926 A-----NAFLKEFCLKCPEYLDENKKPVYLVTTLDNTMEDLL----TLEYV-------KAEKNVP 974
Human 975 DLKSTYNNVLQLIKVNFSSLDIHLH----------------------TEALLNTINYLHNILPQS 1017
Human 1018 EEKSAPVSTTET-----EDKGDVIKKLALKLSTN------------------------------- 1046
Human 1047 ---------EDIITLQILAE---------------------------------LSCLQIFIQDQK 1069
Human 1070 CNISEIKIEGLDSEMIMRPSETEINAKLRNIIVLDSDI-----TAIYKKAVYI--TGKEVFSFKM 1127
Human 1128 ------VSYMDATA------GSAYTDMNV-----------------------------VDIQVNL 1151
Human 1152 IVGCIEVVFVTKFLYSILAFIDNFQAAKQALAEATV-QAAGMAATGVKELAQRSSRMALDINI-K 1214
Human 1215 APV-VVIPQSPVSENVFVADFGLITMTNTFHMITESQSSPPPVIDLITIKLSEMRLYRSRFINDA 1278
Human 1279 YQEV-LDLLLPLNLEVVVE--RNLCWEWYQ------EVPCFNV--------NAQLKPME------ 1320
Human 1321 --FILSQEDITTIFKTLHGNIWYEKDGSAS------PAVTKDQYSATSGVTTNASH------HSG 1371
Human 1372 GATVV--------TAAVVEVHSRALLVKTTLNISFKTDDLTM----------------------- 1405
Human 1406 ---------VLYSP-----------GPKQASFTDVRDPSLKLAEFKLE------------NIIST 1438
Human 1439 LKM-----------------YTDGSTFSSFSLKNCILDDKRP-HV-------------------- 1465
Human 1466 -------KKATP--RMIGLTV------------------GFDKKDM------MDIK--------- 1488
Human 1489 YRKVRDGCV-TDAVF--------QEMYICASVEFLQTVANVFLEAYTTGTAVETSVQTWTAKEEV 1544
Human 1545 PTQESVKWEINVIIKNPEI------VFVADM-------TKNDAPALVITTQCEICYKGNLENSTM 1596
Human 1597 TAAIKDLQVRACPFLPVKRKGKITTVLQPCDLFYQTTQKGTDPQVIDMSVKSLTLKVSPVIINTM 1661
Human 1662 ITITSALYTTKETIPEETASSTAHLWEKKDTKTLKMWFL------------EESNETEKIAPTTE 1714
Human 1715 LVPKGEMIKMNIDSIFIVLEAGIGHRTVPMLLAKSRFSGEGKNWSSLINLHCQLELEVHYYNEMF 1779
Human 1780 GVWEPLLEPLEIDQTE------------DFRPWNLGIKMKKKAKMAIVESDPEEENY---KVPEY 1829
Human 1830 ----KTVISFHSKDQLNITLS-----KCGL---------VMLNNLVKAFTEAATGSSADFV---- 1872
Human 1873 -------------KDLAPFMILNSLGLTISVSPSDSFSVLNIPMAKSYVLKNGESLSMDYIRTKD 1924
Human 1925 NDHFNAMTSLSSKLFFILLTPVNHSTADKIPLTKVGRRLYTVRHRESGVERSIVCQ--------- 1980
Human 1981 ----IDTVEGS---------KKVTIRSPVQIRNHFSVPLSVYEGDTLLGTASPENEFNIPLGSYR 2032
Human 2033 SFIFLKPEDENYQMCEGID---FEEIIKNDG-----------ALLKKKCRSKNPSKESFLINIVP 2083
Human 2084 EKDNLTSLSVYSEDGWDLPYIMHLWPPILLRNLLPYKIAYYIEGIENSVFTLSEGHSAQICTAQL 2148
Human 2149 GKARLHLKLLDYLNHDWKSEYHIKPNQQDISFVSFTCVTEMEKTDLDIAVHMTYNTGQTVVAFHS 2213
Human 2214 PYWMVNKTGRMLQYKADGIHRKHPPNYKKPVLFSFQPNHFFNN------NKVQLMVTDSELSNQF 2272
Human 2273 SIDT----------VGSHGAVKCKGLKMDYQVGVTIDLSSFNITRIVTFTPFYMIKNKSKYHISV 2327
Human 2328 A-------EEGNDKWLSLDLEQCIPF---------WPEYASSKLLIQVERSEDPPKRIYFNKQEN 2376
Human 2377 CILLRLDNELGGIIAEVNLAEHSTVITFLDYHDGAAT---FLLINHTKNELVQYNQS-------- 2430
Human 2431 --------------SLSEIEDSLPPGKAVFYTWADPVGSRRLKWRCRKS---------HGEV-TQ 2471
Human 2472 KDDMMMPIDLGEKTIYLVSFFEGLQRIILFTEDPRVFKVTYESEKAELAEQEIAVALQDVGISLV 2536
Human 2537 NNYTKQEVAYIGITSSDVVWETKPKKKARWKPMSVK------HTEKLEREFKEYTESSPSEDKVI 2595
Human 2596 QLDTNVPVRLTPTGHNMKILQPHVIALRRNYLPALKVEYNTSAHQSSFRIQIYRIQIQNQIHGA- 2659
Human 2660 --VFPFVFYPVKPPKSVTMDSAPKPFTDVSIVMRSAGHSQIS------------------RIKYF 2704
Human 2705 KVLIQEMDLRLDLGFIYALTDLMTEAEVTE---NTEVE----LFHKDIEAFKEEYKTASLVDQSQ 2762
Human 2763 VSLYEYFHISPIKLHLSVSLSSGREEAKDSKQNGGLIPVHSLNLLLKSIGATLTDVQDVVFKLAF 2827
Human 2828 FELNYQFHTTSDLQ--SEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYEPYQG 2890
Human 2891 AIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITGAMAKGVAAMTMDEDYQQKRREAMNKQPAG 2955
Human 2956 FREGITRGGKGLVSGFVSGITGIVTKPIKGAQKGGAAGFFKGVGKGLVGAVARPTGGIIDMASST 3020
Human 3021 FQGIKRATETSEVESLRPPRFFNEDGV------IRPYRLRDGTGNQMLQVMENGRFAKYKYFTHV 3079
Human 3080 MINKTDMLMITRRGVLFVT 3098 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| VPS13A | NP_150648.2 | MRS6 | 4..>2104 | CDD:227376 | 512/3009 (17%) |
| TPR 1 | 212..245 | 5/32 (16%) | |||
| TPR 2 | 373..406 | 6/62 (10%) | |||
| TPR 3 | 537..575 | 8/64 (13%) | |||
| FFAT. /evidence=ECO:0000269|PubMed:30741634 | 842..848 | 3/8 (38%) | |||
| TPR 4 | 1256..1289 | 9/33 (27%) | |||
| TPR 5 | 1291..1320 | 10/44 (23%) | |||
| TPR 6 | 2009..2041 | 4/31 (13%) | |||
| SHR-BD | 2209..>2356 | CDD:461974 | 30/178 (17%) | ||
| TPR 7 | 2568..2601 | 7/38 (18%) | |||
| MRS6 | <2598..3098 | CDD:227376 | 110/535 (21%) | ||
| TPR 8 | 2717..2751 | 6/40 (15%) | |||
| Required for mitochondrial localization. /evidence=ECO:0000269|PubMed:30093493, ECO:0000269|PubMed:30741634 | 2751..3174 | 86/356 (24%) | |||
| VPS13_C | 2766..2943 | CDD:465310 | 47/178 (26%) | ||
| Required for lipid droplet localization. /evidence=ECO:0000269|PubMed:30093493 | 2953..3027 | 22/73 (30%) | |||
| Vps13B | NP_651753.2 | Chorein_N | 4..121 | CDD:463646 | 34/125 (27%) |
| VPS13_C | 3319..3468 | CDD:465310 | 48/179 (27%) | ||
| MRS6 | <3369..3634 | CDD:227376 | 66/261 (25%) |