Sequence 1: | XP_011534876.1 | Gene: | SYNE2 / 23224 | HGNCID: | 17084 | Length: | 6936 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001188695.1 | Gene: | Msp300 / 3771968 | FlyBaseID: | FBgn0261836 | Length: | 13540 | Species: | Drosophila melanogaster |
Alignment Length: | 7606 | Identity: | 1432/7606 - (18%) |
---|---|---|---|
Similarity: | 2691/7606 - (35%) | Gaps: | 2106/7606 - (27%) |
- Green bases have known domain annotations that are detailed below.
Human 150 QPSLDDVSVVDS-SPASSPPAKKCSKVQARWQMSARKALLLWAQEQCATYE-SVNVTDFKSSWRN 212
Human 213 GMAFLAIIHALRPDLIDMKSVKHRSNKDNLREAFRIAEQELKIPRLLEP--EDV---DVVDPDEK 272
Human 273 SIMTYVAQ-------FLQYSKDAPGTGEE----AQGKVKDAMGWLTLQKEKLQKLLKDSENDTYF 326
Human 327 KKYNSLLSFMESFNEEKKSFLDVLSIKRDLDELDKDHLQLREAWDGLDHQINAWKIKLNYALPPP 391
Human 392 LHQTEAWLQEVEELMDED-------LSASQDHSQAVTLIQEKMT-------------------LF 430
Human 431 KSLMDR-FEHHSNILLTFENKDENHLPLVPPNKL---EEMKRRINNILEKKFILLLEFHYYKCLV 491
Human 492 LGLV------DEVKSKLDIWNIKYGS--RESVELLLEDWHKFIEEK-----EFLAR-------LD 536
Human 537 TSF--------QKCGEIYKNLAGECQNINKQYMMVKSDVCMYRKNIYNVKSTLQKVLACWATYV- 592
Human 593 ENLRLLRACFEETKKEEIKEVPFETLAQWNLEHATLNEAGNFLVEVSNDVVGSSISKELRRLNKR 657
Human 658 WRKLVSKTQLEMNLPLMIKKQDQPTFDNSGNI--------LSKEEKATVEFSTDMSVELP----- 709
Human 710 ---------------ENYNQN-------IKAGEKHEKENEEFTGQLKVAKDV----EKLIGQVEI 748
Human 749 WEA-------EAKSVLDQDDVD----------TSME-------------ESLKHLIAKGSMFDEL 783
Human 784 MARSE-DMLQMDI----QNISSQESFQHVLTTGLQAKIQEAKEKVQINVVKLIAALKNL---TDV 840
Human 841 SPDLDIRLKMEESQKELESYMMRAQQLLGQRESPGELISKHKE-----ALIISNTKSLAKYLKAV 900
Human 901 E-ELKNNVTEDIKMSLEEKSRDVCAKWESLHHELSLYVQQLKIDIEKGKLSDNILKLEKQINKEK 964
Human 965 KLIRRGRTKGLIKEHEACFSEEGCLYQLNHHMEVLRE----LCEELPSQKSQQEVKRLLKDYEQK 1025
Human 1026 IERLLKCASEIHM-------------TLQPTAGGTSKNEGTI----TTSENRGGDPHSEAPFAKS 1073
Human 1074 DNQPSTEKAMEPTMKFSLASVLRPLQEESIMEKDYSASINSLLERYDTYRDILEHHLQNNKFRIT 1138
Human 1139 SDFSSEEDRSSSCLQAKLTDLQVIKNET--DARWKEFEIISLKLENHVNDIKKPFVIKERDTLKE 1201
Human 1202 RERELQMTLNTRMESLETALRLVLPVEKASLLLCGSDLPLHKMAIQGFHLIDADRIYQHLRNIQD 1266
Human 1267 SIAKQIEICNRLEEPGNFVLKELHPFDLHAMQNIILKYKTQFEGMNHRVQRSEDTLKALED--FL 1329
Human 1330 ASLRTAKLSAEPVTDLSASDTQ---VAQENTLTVKNKEGEIHLMKDKAKHLDKCLKMLD--MSFK 1389
Human 1390 DAER---GDDTSCENLLDAFSIKLSETHGYGVQEEFTEENKLLEACIFKNNELLKNIQDVQS--- 1448
Human 1449 QISKIGLKDPTVPAVKHRKKSLIRLDKVLDEYEEEKR------HLQEMANSLPHFKDGREKTVNQ 1507
Human 1508 QCQNTVVLWENTKALVTECLEQCGRVLELLKQYQNFKSILTTLIQKEESVISLQASYMGKENLKK 1572
Human 1573 RIAEIEIVKEEFNEHLEVVDKINQVCKNLQFYLNKMKTFEEPPFEKEANIIVDRWLDINEKTEDY 1637
Human 1638 YENLGRALALWDKLFNLKNVIDE----WTEKALQKMELHQLTEED-RERLKEELQVHEQKTSEFS 1697
Human 1698 RRVAEIQFLLQSSEIPLELQVMESSILNKMEHVQKCLTGESNCHALSGSTAELREDLDQAKTQIG 1762
Human 1763 MTESLLKALSPSDSLEIFTKLEEIQQQILQQKHSMILLENQIGCLTPELSELKK-QYESVSDLFN 1826
Human 1827 TKKSVLQDHFSKLLNDQCKNFNDWFSNIKVNLKECFESSETKKSVEQKLQKLSDFLTLEGRNSKI 1891
Human 1892 KQVDSVLKHVKKHLPKAHVKELISWLVGQEFELEKMESICQARAKELEDSLQQLLRLQDDHRNLR 1956
Human 1957 KWLTNQEEKWKGMEEPGEKTELFCQALARKREQFESVAQLNNSLKEYGFTEEEEI----IMEATC 2017
Human 2018 LMDRYQTLLRQLSEIEEEDKLLPTED-QSFNDLAHDVIHWIKEIKESLMVLNSSEGKMPLEERIQ 2081
Human 2082 KIKEIILLKPEGDARIETIMKQAESSEAPLVQKTLTDISNQWDNTLHLASTYLSHQEKLLLEGEK 2146
Human 2147 YLQSKEDLRLMLIELKKKQEAGFALQHGLQEKKAQLKIYKKFLKKAQDLTSLLKELKSQGNYLLE 2211
Human 2212 CTKNPSFSEEPWLEIKHLHESLLQQLQDSVQNLDGHVREHDSYQVCVTDLNTTLDNFSKEFVSFS 2276
Human 2277 DKPVDQIAVEEKLQKLQELENRLSLQDGTLKKILALAKSVKQNTSSVGQKIIKDDIKSLQCKQKD 2341
Human 2342 LENRLASAKQEMECCLNSILKSKRSTEKKGKFTLPGREKQATSDVQESTQESAAVEKLEED---- 2402
Human 2403 ---WEINKDSAVEM------------AMSKQLSLNAQESMKNTEDERKVNELQNQPLELDTMLRN 2452
Human 2453 EQLEEIEKLYTQLEAKKAAIKPLEQTECLNKTETGALVLHNIGYSAQHLDNLLQALITLKKNKES 2517
Human 2518 QYCVLRDFQEYLAAVESSMKALLTDK--ESLK-VGPLDSVTYLDKIKKFIASIEKEKDSLGNLKI 2579
Human 2580 KWENLS------NHVTDMDKKLLESQIKQLEHGWEQVEQQIQKKYSQQVVEYDEFTTLMNKVQDT 2638
Human 2639 EISLQQQQQHLQLRLKSPEERAGNQSMIALTTDLQATKHGFSVLKGQAELQMKRIWGEKEKKNLE 2703
Human 2704 DGINNLKKQW-ETLEPLHLEAEN-QIKKCDIRNKMKETILWAKNLLGELNPSIPL-LPDDI---- 2761
Human 2762 ---------------LSQIRK-------------CKVTHDGILARQQSVESLAEEVKDKVPSLTT 2798
Human 2799 YEGSDLNNTLEDLR--NQYQMLVL-------------------------KSTQRSQQLEFKLEER 2836
Human 2837 SNFFAIIRKFQLMVQESETLIIPRVETAATEAELKHHHVTL------EASQKEL--QEID----- 2888
Human 2889 -------------SGISTHLQELTNIYEELNVFERLFLEDQLKN--LKIRTN-RIQRFIQNTCNE 2937
Human 2938 VEHKIKFCRQ--------FHEKTSALQEEADSIQRNELLLNQ----------------------E 2972
Human 2973 VNKGVKEE----IYNLKDRLTAIKCCILQVLKLKKVFDYIGLNWDFSQL-----DQLQTQVFEKE 3028
Human 3029 KELEEKIKQLDTFEEEHGKYQALLSKMRAIDLQIKKMTEV---------VLKAPDSSPESRRLNA 3084
Human 3085 QILSQRIEKAKCLCDEIIKKLNENKTFDDSFKEKEILQIKLNAEENDKLYKVLQNMVLELSPKEL 3149
Human 3150 DEKNCQDKLETSLHVLNQIKSQLQQPLLINLEIKHIQNEKDNCEAFQEQVWAEMCSIKAVTAIEK 3214
Human 3215 QREENSSEASDVETKLREFEDLQMQLNTSIDLRTNVLNDAYENL---TRY----KEAVTRAVESI 3272
Human 3273 -----------------TSLEAIIIPYRVDVGNPEESLEMPLRK---------QEELESTVAHIQ 3311
Human 3312 DLTEKLGMISSPEAKLQLQYT-----------LQELVSK-------NSAMKEAFKAQETEAERYL 3358
Human 3359 ENYKCYRKMEEDIYTNLSKMETVLGQSMSSLPLSYREALERLEQSKALVSNLIS--TKEELMKLR 3421
Human 3422 QILRLLRLRCTENDGICLLKIVSALWEKWLSLLEAAKEWEMWCEELKQ----------EWKFVSE 3476
Human 3477 E-----IEREAIILDNLQEELPEISKTKEAATTEELSELLDCLCQYGENVEKQQLLLTLLLQRIR 3536
Human 3537 SIQNVPESSGAVETVPAFQEITSMKERCNKL-LQKVQKNKELVQTEIQERHSFTKEIIALKNFFQ 3600
Human 3601 QTTTSFQNMAFQDHPEKSEQFEE---LQSILKKGKLTFENIMEKLRIKYSEMYTIVPAEIESQVE 3662
Human 3663 ECRKALEDI------------------------DEKISNEVLK---SSPSYAMRRKIEEINNGLH 3700
Human 3701 NVEKMLQQKSKNIEKAQE--IQKKMWDELDLWHSKLNELDSEVQDIVEQDPGQAQEWMDNLMIPF 3763
Human 3764 -------QQYQQVSQRAECRTSQLNKATVKMEEYSDLLKSTEAWIENTSHLLANPADYDSLRTLS 3821
Human 3822 HHASTVQMALED--------SEQK------HNLLHSIFMDLEDLSIIFETDELTQSIQELSNQVT 3872
Human 3873 ALQQKIMESLPQIQ---------------RMADDVVA---------------------------- 3894
Human 3895 ----------IESEVKSMEKRVSKIKTILLSKEI---FDFSPEEHLKHGEVI-------LENIR- 3938
Human 3939 PMKKTIAE--IVSY--------QVELRLP-------------QTGMKPLPVFQRTNQLLQDIKLL 3980
Human 3981 ENVTQEQNELLKVVIKQTNE-WDEEIENLKQILNNYSAQFSLEHMSPDQADKLPQLQG-----EI 4039
Human 4040 ERMEKQILSLNQRKEDLLVDLKATVLNLHQHLKQEQEGVERDRLPAVTSEEGGVAERDASERKLN 4104
Human 4105 RRGSMSYLAAVEEEVEESSVKSDNGDEKAEPSPQSWSSLWKHDKDMEEDRASSSSGTIVQEAYGK 4169
Human 4170 ISTS---DNSMAQI----LTPDSLNTEQGPECSLRPNQTEEGTTPPIEADTLDSSDAQGGLEPRV 4227
Human 4228 EKTRPEPTEVLHACKTQ-------------VAELELWL---QQANVAVE--PETLNADMQQVLEQ 4274
Human 4275 QLVGCQAMLTEIEHKVAFLLETCKDQGLGDNGATQHEAEALSLKLKTVKCNLEKVQMMLQEKHSE 4339
Human 4340 DQHPTILKKSSEPEHQEALQPVNLSELESIVTERPQFSRQKDFQQQQVLELK----PMEQKDFIK 4400
Human 4401 FIEFNAKKMWPQYCQHDNDTTQESSASNQASSPENDVPDS-----ILSPQGQNGDKWQYLHHE-- 4458
Human 4459 -LSSK---------IKLPLPQLVEPQVSTNMGILPSVTMYNFRYPTTEELKTYTTQLEDLRQEAS 4513
Human 4514 NLQTQENM--TEEAYINLDKKLFE-----LFLTLSQCLSSVEEMLEMPRLYREDGSGQQV--HYE 4569
Human 4570 TLALELKKLYLALSDKKGDLLKAMTWPGENTNLLLECFDNLQVCLEHTQAA-AVCRSKSLKAGLD 4633
Human 4634 YNRSYQNEIKRLYHQLIKSKTSLQQSLNEISGQS--VAEQLQKADAYTVELENAESRVAKLRDEG 4696
Human 4697 ERLHLPY---ALLQEVYKLEDVLDSMWGMLRA---RYTELSSPFVTESQQDALLQGMVELVKIG- 4754
Human 4755 -KEKLAHGHLKQTKSKVALQAQIENHKVFFQKLVADMLLIQAYSAKILPSLLQNRETFWAEQVTE 4818
Human 4819 V--------KILEEKSRQCGMKLQSLLQKWEEFDENYASLEKDLEILISTLPSVSLVEETEERLV 4875
Human 4876 ERISFYQQIKRNIGGKHARLYQTLNEGKQLVASVSCPELEGQIAKLEEQWLSLNKKIDHELHRLQ 4940
Human 4941 ALLKHLLSYNRDSDQLTKWLESSQHTLNYWKEQSLNVSQDLDTIRSNINNFFEFSKEVDEKSSLK 5005
Human 5006 TAV-ISIGNQLLHLKETDTATLRASLAQFEQKWTMLITQLPDIQEKLHQ-LQMEKLPSRKAITEM 5068
Human 5069 ISWMNNVEHQTSDEDSVHSPSSASQVKHLLQKHKEFRMEMDYKQWI---VDFVNQSLLQLSTCDV 5130
Human 5131 ESKRYERTEFAEHLGEMNRQWHRVHGMLNRKIQHLEQLLESITESENKIQILNNWLEAQEERLKT 5195
Human 5196 LQKPESVISV----------------QKLLLDCQDIENQLAIKSKALDELKQSYLTL------ES 5238
Human 5239 GAVPLLEDTASRIDELFQKRSSVLTQVNQLKTSMQSVLQEWKIYDQLYDEVNMMTIRFWYCME-- 5301
Human 5302 --HSKPVVLSLETLRCQVENLQSLQDEAESSEGSWEKLQEVIGKLKGLCPS----VAEIIEEKCQ 5360
Human 5361 NTHKRWTQVNQAIADQLQKAQSLLQLWKAYSNAHGEAAARLKQQEAKFQQLANISMSGNNLAEIL 5425
Human 5426 PPALQDIKELQHDVQKTKEAFLQNSSVLDRLPQPAESSTHMLLPGPLHSL-QRAAYLEKMLLVKA 5489
Human 5490 NEFEFVLSQFKDFGVRLESLKGLIMHEEENLDRLHQQEKENPDSFLNHVLALTAQSPDI----EH 5550
Human 5551 LNEVSLKLPLSDVA------------------VKTLQNMNRQWIRATATALERCSELQGIGLNEK 5597
Human 5598 FLYCCEKWIQLLEKIEEALKVDVANSLPELLEQQKTYKMLEAEVSINQTIADSYVTQSLQLLDTT 5662
Human 5663 EIENRPEFITEFSKLTDRWQNAVQGVRQRKGDVDGLVRQWQDFTTSVENLFRFLTDTSHLLSAVK 5727
Human 5728 GQERFSLYQTRSLIHELKNKEIHFQRRRTTCALTLEAGE---KLL--------------LTTDLK 5775
Human 5776 TKE-SVGRRISQLQ---DSWKDMEPQLAEMIKQFQSTVETWDQCEKKIKELKSRLQVLKAQSEDP 5836
Human 5837 LPELHEDLHNEKELIKELEQSLASWTQNLKELQTMKADLTRHVLVEDVMVLKEQIEHLHRQWEDL 5901
Human 5902 CLRVAIRKQEIEDRLNTWVVFNEKNKELCAWLVQMENKVLQTADISI----EEMIEKLQKDCMEE 5962
Human 5963 INLFSENKLQLKQMGDQLIKA-SNKSRAAEIDDKLNKINDRWQHLFDVIGSRVKKLKETFAFIQQ 6026
Human 6027 LDKNMSNLRTWLARIESELSKPVVYDVCDDQEIQKRLAEQQDLQRDIEQHSAGVESVFNICDVLL 6091
Human 6092 HDSDACANETECDSIQQTTRSLDRRWRNICAMSMERRMKIEETWRLWQKFLDDYSRFEDWLKSAE 6156
Human 6157 RTAACPNSSEVLYTSAKEELKRFE--AFQRQIHERLTQLELINKQYRRLAR------ENRTDTAS 6213
Human 6214 RLKQMVHEGNQRWDNLQRRVTAVLRRLRHFTNQREEFEGTRESILVWLTEMDLQLTNVEHFSESD 6278
Human 6279 ADDK----MRQLNGFQQEITLNTNKI----DQLIVFGEQLIQKSEPLDAVL-----IEDELEELH 6330
Human 6331 RYCQEVFGRVSRFHRRLTSCTPGLEDEKEASENETDMEDPREIQT------DSWRKRGESEEPSS 6389
Human 6390 PQSLCHLVAPGHERSGCETPVSVDSIPLEWDHTGDVGGSSSHEEDEEGPYYSALSDVEIPENPEA 6454
Human 6455 YLKMTTKTLKASSGKSISDGHSWHVPDSPSCPEHHYKQMEG---DRNVPPVP---------PASS 6507
Human 6508 TPYKPPYGKLLLP--PGTDGGKEGPRVLNGNPQQEDGGLAGITEQQSGTACNWQSSREAEYGAFD 6570
Human 6571 RWEMIQAQELHNKLKIKQNLQQLNSDISAITTWLKKTEAELEMLKMAKPPSDIQEIELRVKRLQE 6635
Human 6636 ILKAFDTYKALVVSVNVSSKEF----LQTESPESTELQSRLRQLSLLWEAAQGAVDSWRGGLRQS 6696
Human 6697 LMQCQGSKTRPRSDVLFFKDFHQLSQNLLLWLASAKNRRQKAHVTDP--KADPRALLECR-RELM 6758
Human 6759 QLEKELVERQPQVDMLQEISNSLLIKGHGEDCIEAEEKVHVIEK---KLKQLREQVSQDLMALQG 6820
Human 6821 T-------------QNPASPLPSFDEVDSGDQPPATSVPAPRAKQFRAVRTTEGEEETESRVPGS 6872
Human 6873 TRPQRS--FLSRVVRAALPLQLLLLLLLLLACLLPSSEEDYSCTQANNFARSFYPMLRYTNGPPP 6935
Human 6936 T 6936 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SYNE2 | XP_011534876.1 | CH | 33..135 | CDD:237981 | |
CH | 182..281 | CDD:278723 | 23/111 (21%) | ||
PRK03918 | <1418..2014 | CDD:235175 | 102/614 (17%) | ||
SPEC | 1840..2031 | CDD:295325 | 34/194 (18%) | ||
PRK03918 | <1868..>2369 | CDD:235175 | 82/505 (16%) | ||
SbcC | 2877..>3417 | CDD:223496 | 126/669 (19%) | ||
SbcC | <3298..3912 | CDD:223496 | 129/764 (17%) | ||
SPEC | 3690..3880 | CDD:295325 | 40/212 (19%) | ||
SPEC | 4945..5169 | CDD:238103 | 36/228 (16%) | ||
SPEC | 5063..5276 | CDD:238103 | 38/237 (16%) | ||
SPEC | 5178..5384 | CDD:295325 | 48/235 (20%) | ||
SPEC | 5701..5916 | CDD:295325 | 49/235 (21%) | ||
SPEC | 5919..6133 | CDD:238103 | 54/218 (25%) | ||
SPEC | 6137..6350 | CDD:238103 | 49/233 (21%) | ||
SPEC | 6590..6813 | CDD:238103 | 58/232 (25%) | ||
KASH | <6905..6936 | CDD:287506 | 17/30 (57%) | ||
Msp300 | NP_001188695.1 | SPEC | 17..220 | CDD:238103 | |
SPEC | 9546..9732 | CDD:295325 | 41/195 (21%) | ||
sbcc | 11187..12008 | CDD:129705 | 171/909 (19%) | ||
SMC_prok_B | 11614..12442 | CDD:274008 | 174/923 (19%) | ||
SPEC | 11994..12156 | CDD:295325 | 39/175 (22%) | ||
SPEC | 12374..12564 | CDD:295325 | 42/208 (20%) | ||
Lipase_chap | 12376..12529 | CDD:281297 | 36/171 (21%) | ||
SPEC | 12703..12923 | CDD:238103 | 60/263 (23%) | ||
SPEC | 12816..13032 | CDD:295325 | 55/263 (21%) | ||
SPEC | 13196..13374 | CDD:238103 | 50/198 (25%) | ||
KASH | 13484..13540 | CDD:287506 | 33/56 (59%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 73 | 1.000 | Domainoid score | I9258 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D46at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_104187 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.820 |